DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myh3 and Prm

DIOPT Version :9

Sequence 1:NP_001093105.1 Gene:Myh3 / 17883 MGIID:1339709 Length:1940 Species:Mus musculus
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:851 Identity:295/851 - (34%)
Similarity:505/851 - (59%) Gaps:15/851 - (1%)


- Green bases have known domain annotations that are detailed below.


Mouse  1085 DFEYSQLQSKVEDEQTLSLQLQKKIKELQARIEELEEEIEAERATRAKTEKQRSDYARELEELSE 1149
            :.||      ::|..:|| :|:.||:.||       :::|.||..|.:.|::::|.:.::.::||
  Fly    27 NIEY------IQDLSSLS-RLEDKIRLLQ-------DDLEVERELRQRIEREKADLSVQVIQMSE 77

Mouse  1150 RLEEAGGVTSTQIELNKKREAEFLKLRRDLEEATLQHEATVATLRKKHADSAAELAEQIDNLQRV 1214
            |||||.|....|.|.|:||:||.||||:.||:..|:.|.|...|:|||.:...:..||::.|.:.
  Fly    78 RLEEAEGGAEHQFEANRKRDAELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKN 142

Mouse  1215 KQKLEKEKSEFKLEIDDLSSSVESVSKSKANLEKICRTLEDQLSEARGKNEEMQRSLSELTTQKS 1279
            |.:.||:|::|:.|:.:|.|.:||.:|.|...||....||..:||...|.||:.|::.::::.:|
  Fly   143 KARAEKDKAKFQTEVYELLSQIESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRS 207

Mouse  1280 RLQTEAGELSRQLEEKESIVSQLSRSKQAFTQQIEELKRQLEEENKAKNALAHALQSSRHDCDLL 1344
            ||..|..||::.:::.:..:..:|.||.....|:|:.:|:||:|::.::.|..:|.....:.|.:
  Fly   208 RLSQENIELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSV 272

Mouse  1345 REQYEEEQEGKAELQRALSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQDSEEQVEAVN 1409
            |.|.|||.|.:.:|:|.|.|||::...|:.|:.::...|.||:||.::|...|:.:.||.:|::.
  Fly   273 RNQLEEESEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLI 337

Mouse  1410 AKCASLEKTKQRLQGEVEDLMVDVERANSLAAALDKKQRNFDKVLAEWKTKCEESQAELEAALKE 1474
            .|..:|||.|.||..|||.|::|:|::|:....|.|.....:|...|.|::.:|:....|.:.::
  Fly   338 VKVNNLEKMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRD 402

Mouse  1475 SRSLSTELFKLKNAYEEALDQLETVKRENKNLEQEIADLTEQIAENGKSIHELEKSRKQMELEKA 1539
            .::...:|.:..:..::..|....:.||||.|..::.:....|.|..:.:||||...:::|.|:.
  Fly   403 LKNKHADLVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERD 467

Mouse  1540 DIQMALEEAEAALEHEEAKILRIQLELTQVKSEIDRKIAEKDEEIEQLKRNYQRTVETMQG-ALD 1603
            ::..|.:||||..:.||.:..|:..:..|.:.:.:|::||||||||.:::.....:|.:.. .::
  Fly   468 ELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIE 532

Mouse  1604 AEVRSRNEAIRLKKKMEGDLNEIEIQLSHANRQAAETIKHLRSVQGQLKDTQLHLDDALRGQEDL 1668
            ||.|.:.|..|:|||::..:.|:|:.|..||:...:..|.::....||.:.|.|.:|..|..:..
  Fly   533 AETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQAT 597

Mouse  1669 KEQLAIVERRANLLQAEVEELRATLEQTERARKLAEQELLDSNERVQLLHTQNTSLIHTKKKLET 1733
            .:|.|:.:||...|..|:||:|:.|:...||::..|.:..::..|:..|.|.|.||:..|.|||.
  Fly   598 LDQYAVAQRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQ 662

Mouse  1734 DLTQLQSEVEDACRDARNAEEKAKKAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRL 1798
            :|:.:.|:.|:..::.|.::|:.:|...:...:.|::.:||:....||.:||:||..||:|..||
  Fly   663 ELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRL 727

Mouse  1799 DEAEQLALKGGKKQIQKLETRIRELEFELEGEQKRNTESVKGLRKYERRVKELTYQSEEDRKNVL 1863
            :|.|..|:.|.|:.|.|||.|||:||.|||.|::|:.|::|.|||.||.|||:..|.|||:||::
  Fly   728 EEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLI 792

Mouse  1864 RLQDLVDKLQVKVKSYKRQAEEADEQANAHLTKFRKAQHELEEAEERADIAESQVNKLRAKTRDF 1928
            .|||.:||...|:..|:||..|.:..:....|:.|:.|.|||.||:|||.|||.:|.:|||.|.|
  Fly   793 LLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHRTF 857

Mouse  1929 TSSRMV 1934
            .::..|
  Fly   858 VTTSTV 863

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myh3NP_001093105.1 Myosin_N 35..73 CDD:367160
MYSc_Myh3 100..767 CDD:276878
Actin-binding. /evidence=ECO:0000250 656..678
Actin-binding. /evidence=ECO:0000250 758..772
Myosin_tail_1 847..1924 CDD:366712 290/839 (35%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1260..1289 9/28 (32%)
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 287/826 (35%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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