DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myh11 and Prm

DIOPT Version :9

Sequence 1:XP_006521906.1 Gene:Myh11 / 17880 MGIID:102643 Length:1979 Species:Mus musculus
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:883 Identity:236/883 - (26%)
Similarity:424/883 - (48%) Gaps:84/883 - (9%)


- Green bases have known domain annotations that are detailed below.


Mouse  1117 LKKIRELEGHISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELRAKREQ 1181
            |..:..||..|..||:||:.||..|.:.|::|.||..::..:...||:.......|.|...||:.
  Fly    34 LSSLSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDA 98

Mouse  1182 EVTVLKKALDEETRSHEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKSKQTLEKENADLAGE 1246
            |:..|:|.|::.....|.....:::||.:.:.:..||:|...:.||..:|.|...:.|..:|..:
  Fly    99 ELLKLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQ 163

Mouse  1247 LRVLGQAKQEVEHKKKKLEVQLQDLQSKCSDGERARAELSDKVHKLQNEVESVTGMLNEAEGKAI 1311
            :....:.|...|....||||.:.:|..|..:..|...::|....:|..|              .|
  Fly   164 IESYNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQE--------------NI 214

Mouse  1312 KLAKDVASLG--------------SQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQDQLDEE 1362
            :|.|||..|.              |||:|.:..|::|.|::..:.:.|.|:|.|.:|:::||:||
  Fly   215 ELTKDVQDLKVQLDTVSFSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEE 279

Mouse  1363 MEAKQNLERHVSTLNIQLSDSKKKL-QDFASTIEVMEEGKKRLQKEMEGLSQQYEEKAAAYDKLE 1426
            .||:.:|||.:...|...:..:.|. .:.|:..|.:||.:::.|..:..|.:..|......:.||
  Fly   280 SEARIDLERQLVKANADATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLE 344

Mouse  1427 KTKNRLQQELDDLVVDLDNQ----RQL---VSNLEKKQKKFDQLLAE--------EKNISSKYAD 1476
            |.|.||..|::.|::||:..    |:|   |:.|||...:....|.|        ::::.:|:||
  Fly   345 KMKTRLASEVEVLIIDLEKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHAD 409

Mouse  1477 ERDRAEAEAREKETKALSLARALEEALEAKE---ELERTNKMLKAEMEDLVSSKDDVGKNVHELE 1538
                              |.|.:.|..:.|:   :|.|.||.|..::.:...:.:::.:.:||||
  Fly   410 ------------------LVRTVHELDKVKDNNNQLTRENKKLGDDLHEAKGAINELNRRLHELE 456

Mouse  1539 KSKRALETQMEEMKTQLEELEDELQATEDAKLRLEVNMQALKGQFERDLQARDEQNEEKRRQLQR 1603
            ...|.||.:.:|:....:|.|...:|.|....||..:....:...||.|..:||:.|..|:|...
  Fly   457 LELRRLENERDELTAAYKEAEAGRKAEEQRGQRLAADFNQYRHDAERRLAEKDEEIEAIRKQTSI 521

Mouse  1604 QLHEYETE-LEDERKQRALAAAAKKKLEGDLKDLELQADSAIKGR---EEAIK----QLRKLQAQ 1660
            ::.:.... :|.|.:.:......||||:..:.:||:..|.|.|..   ::.||    ||.:|||.
  Fly   522 EIEQLNARVIEAETRLKTEVTRIKKKLQIQITELEMSLDVANKTNIDLQKVIKKQSLQLTELQAH 586

Mouse  1661 MKDFQRELDDARASRDEIFATSKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEELA 1725
            .:|.||:|   :|:.|: :|.:   :::...|..:|.:::..|.:|.||::..:|:.||.|..:.
  Fly   587 YEDVQRQL---QATLDQ-YAVA---QRRLAGLNGELEEVRSHLDSANRAKRTVELQYEEAASRIN 644

Mouse  1726 SSLSGRNTLQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATLQAEQLSNELATERSTAQKN 1790
            ...:...:|...|.:||..::.:..:.||....:....:|.:|..::.:.:..::..|:....|.
  Fly   645 ELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQKVQVELKHVVEQVHEEQERIVKL 709

Mouse  1791 ESARQQLERQNKELRSKLQEVEGAVKAKLKSTVAALEAKIAQLEEQVEQEAREKQAATKSLKQKD 1855
            |:.::.||.:.|.|..:|:|||....|..|..::.|||:|..||.::|:|.|......|.|::|:
  Fly   710 ETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRDLELELEEEKRRHAETIKILRKKE 774

Mouse  1856 KKLKEVLLQVEDERKMAEQYKEQAEKGNTKVKQLKRQLEEAEEESQRINANRRKLQRELDEATES 1920
            :.:||||:|.|:::|.....::..:|...|:...:|||.|.|..||:.....|:.||||:.|.:.
  Fly   775 RTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQEGVSQQTTTRVRRFQRELEAAEDR 839

Mouse  1921 NEAMGREVNALKSKLRRGNEASFVPSRRAGGRRVIENT 1958
            .:.....:|.:::|.|.....|.||    |.:..|:.|
  Fly   840 ADTAESSLNIIRAKHRTFVTTSTVP----GSQVYIQET 873

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myh11XP_006521906.1 Myosin_N 33..71 CDD:367160
MYSc_class_II 99..778 CDD:276951
Myosin_tail_1 855..1935 CDD:366712 228/858 (27%)
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 228/857 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.