DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Myh1 and Prm

DIOPT Version :9

Sequence 1:NP_109604.1 Gene:Myh1 / 17879 MGIID:1339711 Length:1942 Species:Mus musculus
Sequence 2:NP_523982.2 Gene:Prm / 39002 FlyBaseID:FBgn0003149 Length:879 Species:Drosophila melanogaster


Alignment Length:819 Identity:292/819 - (35%)
Similarity:492/819 - (60%) Gaps:1/819 - (0%)


- Green bases have known domain annotations that are detailed below.


Mouse  1115 IKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQ 1179
            :..|:.:|..|::::|.||..|.:.|::::|||.::.::|||||||.|....|.|.|:||:||..
  Fly    37 LSRLEDKIRLLQDDLEVERELRQRIEREKADLSVQVIQMSERLEEAEGGAEHQFEANRKRDAELL 101

Mouse  1180 KMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQKLEKEKSEMKMEIDDLASNMEV 1244
            |:|:.||:..|:.|.|...|:|||.:.:.:..||::.|.:.|.:.||:|::.:.|:.:|.|.:|.
  Fly   102 KLRKLLEDVHLESEETTLLLKKKHNEIITDFQEQVEILTKNKARAEKDKAKFQTEVYELLSQIES 166

Mouse  1245 ISKSKGNLEKMCRTLEDQVSELKTKEEEQQRLINELTAQRGRLQTESGEYSRQLDEKDSLVSQLS 1309
            .:|.|...||....||..:|||..|.||..|.:.::::.|.||..|:.|.::.:.:....:..:|
  Fly   167 YNKEKIVSEKHISKLEVSISELNVKIEELNRTVIDISSHRSRLSQENIELTKDVQDLKVQLDTVS 231

Mouse  1310 RGKQAFTQQIEELKRQLEEEIKAKSALAHALQSSRHDCDLLREQYEEEQEAKAELQRAMSKANSE 1374
            ..|.....|:|:.:|:||:|.:.:|.|..:|.....:.|.:|.|.|||.||:.:|:|.:.|||::
  Fly   232 FSKSQVISQLEDARRRLEDEDRRRSLLESSLHQVEIELDSVRNQLEEESEARIDLERQLVKANAD 296

Mouse  1375 VAQWRTKYETDAIQRTEELEEAKKKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDV 1439
            ...|:.|:.::...|.||:||.::|...|:.:.|||:|::..|..:|||.|.||.:|||.|:||:
  Fly   297 ATSWQNKWNSEVAARAEEVEEIRRKYQVRITELEEHIESLIVKVNNLEKMKTRLASEVEVLIIDL 361

Mouse  1440 ERTNAACAALDKKQRNFDKILAEWKQKYEETHAELEASQKESRSLSTELFKIKNAYEESLDHLET 1504
            |::|.:|..|.|.....:|...|.|.:.:||....|.||::.::...:|.:..:..::..|:...
  Fly   362 EKSNNSCRELTKSVNTLEKHNVELKSRLDETIILYETSQRDLKNKHADLVRTVHELDKVKDNNNQ 426

Mouse  1505 LKRENKNLQQEISDLTEQIAEGGKRIHELEKIKKQIEQEKSELQAALEEAEASLEHEEGKILRIQ 1569
            |.||||.|..::.:....|.|..:|:||||...:::|.|:.||.||.:||||..:.||.:..|:.
  Fly   427 LTRENKKLGDDLHEAKGAINELNRRLHELELELRRLENERDELTAAYKEAEAGRKAEEQRGQRLA 491

Mouse  1570 LELNQVKSEIDRKIAEKDEEIDQL-KRNHIRVVESMQSTLDAEIRSRNDAIRLKKKMEGDLNEME 1633
            .:.||.:.:.:|::|||||||:.: |:..|.:.:.....::||.|.:.:..|:|||::..:.|:|
  Fly   492 ADFNQYRHDAERRLAEKDEEIEAIRKQTSIEIEQLNARVIEAETRLKTEVTRIKKKLQIQITELE 556

Mouse  1634 IQLNHSNRMAAEALRNYRNTQGILKDTQLHLDDALRGQEDLKEQLAMVERRANLLQAEIEELRAT 1698
            :.|:.:|:...:..:..:.....|.:.|.|.:|..|..:...:|.|:.:||...|..|:||:|:.
  Fly   557 MSLDVANKTNIDLQKVIKKQSLQLTELQAHYEDVQRQLQATLDQYAVAQRRLAGLNGELEEVRSH 621

Mouse  1699 LEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKKKLETDISQIQGEMEDIVQEARNAEEKAK 1763
            |:...|:::..|.:..:|:.|:..|.|.|.||::.|.|||.::|.:..:.|::.:|.|.::|:.:
  Fly   622 LDSANRAKRTVELQYEEAASRINELTTANVSLVSIKSKLEQELSVVASDYEEVSKELRISDERYQ 686

Mouse  1764 KAITDAAMMAEELKKEQDTSAHLERMKKNLEQTVKDLQHRLDEAEQLALKGGKKQIQKLEARVRE 1828
            |...:...:.|::.:||:....||.:||:||..||:|..||:|.|..|:.|.|:.|.|||||:|:
  Fly   687 KVQVELKHVVEQVHEEQERIVKLETIKKSLEVEVKNLSIRLEEVELNAVAGSKRIISKLEARIRD 751

Mouse  1829 LEGEVENEQKRNVEAIKGLRKHERRVKELTYQTEEDRKNVLRLQDLVDKLQSKVKAYKRQAEEAE 1893
            ||.|:|.|::|:.|.||.|||.||.|||:..|.|||:||::.|||.:||..:|:..|:||..|.|
  Fly   752 LELELEEEKRRHAETIKILRKKERTVKEVLVQCEEDQKNLILLQDALDKSTAKINIYRRQLSEQE 816

Mouse  1894 EQSNVNLAKFRKIQHELEEAEERADIAESQVNKLRVKSR 1932
            ..|.....:.|:.|.|||.||:|||.|||.:|.:|.|.|
  Fly   817 GVSQQTTTRVRRFQRELEAAEDRADTAESSLNIIRAKHR 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Myh1NP_109604.1 Myosin_N 35..73 CDD:367160
MYSc_Myh1_mammals 100..773 CDD:276875
Actin-binding. /evidence=ECO:0000250 662..684
Actin-binding. /evidence=ECO:0000250 764..778
Myosin_tail_1 853..1930 CDD:366712 290/815 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1156..1175 10/18 (56%)
PrmNP_523982.2 Myosin_tail_1 <34..853 CDD:279860 290/815 (36%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0161
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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