DRSC/TRiP Functional Genomics Resources

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Protein Alignment lag-2 and NimA

DIOPT Version :10

Sequence 1:NP_503877.1 Gene:lag-2 / 178755 WormBaseID:WBGene00002246 Length:402 Species:Caenorhabditis elegans
Sequence 2:NP_609691.6 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster


Alignment Length:427 Identity:71/427 - (16%)
Similarity:121/427 - (28%) Gaps:176/427 - (41%)


- Green bases have known domain annotations that are detailed below.


 Worm   124 CARNYFGN------RCENFCDAHLAKAARKRCDAMGRLRCDIGWMGPHCGQAVDPRK-------- 174
            |.:.|.||      .|:..|   .....|..|.......|:.|::|.||.|..|..:        
  Fly   112 CCQGYEGNLSDSQATCKPIC---RGGCGRGSCVMPDICSCEEGYIGKHCTQRCDHDRWGLDCKNL 173

 Worm   175 CSCENDGICVSSMIHPSQPNQTSSNEQLICECTNGFTGTRCEI------FGF------------- 220
            |.|:|...|              .|:..:|.|..|:||..||:      :|.             
  Fly   174 CQCQNGAAC--------------DNKSGLCHCIAGWTGQFCELPCPQGTYGIMCRKACDCDEKPC 224

 Worm   221 -----------NQFQLT-------------------------APRPDACSVKDACLNGAKCFPNG 249
                       ...||.                         .|.|:...:|....|  :...:.
  Fly   225 NPQTGACIQQDQPLQLNVSHVIVETVNSTLEKMGIIPRPTTPVPLPEVIVIKQPTSN--ENAQHS 287

 Worm   250 PKVFCSCAVGFIGEFCEISLTTTTPTTVEITVSTSGYSS-------------------------- 288
            ||:....:...:.|....:.....||...|.|.|:|.:|                          
  Fly   288 PKIIVHQSSSDLLENLHTAAAAGVPTPEVIHVITNGITSPQEHLAGFVGGEANSSQTATADHQSG 352

 Worm   289 --AVYITVALFVIFSIIIG-CFKYKFKPMRQQAL--ARGQV------------------------ 324
              ...:::.|.::.:|.:| .:.|:....:..|:  |.|.|                        
  Fly   353 LVVTLVSIMLLLLVAIAVGSLYVYRRYHHKNAAVYNANGTVTTLPANPEVVLTEAAVLGKNFHEP 417

 Worm   325 -PEP-----------------YKMPETKSMLIDPEASEAQKK-VFTI------EGSVQK-IDEEV 363
             |||                 |..|...|.:..|..:.|:|: ::::      :||:.. :.:|:
  Fly   418 LPEPPVAFAVTPQSNEAQPELYDSPSNNSSIKTPPYAYARKESLYSVVSPKSRKGSLDSHLYDEI 482

 Worm   364 RYTSA-------PRKYESNNEYAVIQKSTPPPPSLSP 393
            ||...       ||.::.........:..|..|.:.|
  Fly   483 RYHQQHHHQQHHPRSHQHVQHSTTASQFLPARPQIMP 519

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lag-2NP_503877.1 DSL 103..166 CDD:128366 11/47 (23%)
NimANP_609691.6 EMI 51..118 CDD:462204 2/5 (40%)

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