DRSC/TRiP Functional Genomics Resources

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Protein Alignment ced-3 and Decay

DIOPT Version :9

Sequence 1:NP_001255708.1 Gene:ced-3 / 178272 WormBaseID:WBGene00000417 Length:503 Species:Caenorhabditis elegans
Sequence 2:NP_477462.1 Gene:Decay / 42008 FlyBaseID:FBgn0028381 Length:308 Species:Drosophila melanogaster


Alignment Length:311 Identity:91/311 - (29%)
Similarity:148/311 - (47%) Gaps:56/311 - (18%)


- Green bases have known domain annotations that are detailed below.


 Worm   213 HEED----MNFVDAPT---------ISRVFDEKTMYRNFSSPRGMCLIINNEHFEQMPTRNGTKA 264
            |::|    ......||         |||..:|.| |.| .:..|:.||:|::..:....|.||:.
  Fly    15 HKKDKADATKIAHTPTSELDLKRIIISRPTNEDT-YEN-CARAGIALILNHKDVKGQKQRVGTER 77

 Worm   265 DKDNLTNLFRCMGYTVICKDNLTGRGMLLTIRDFAKHE-SHGDSAILVILSHGEENVIIGVDDIP 328
            |:|::....:..|:.|...|:||...:..|:::.|:.: |..|..:|.::|||.|..:. ..|:.
  Fly    78 DRDDMEATLQGFGFDVRTFDDLTFSEINDTLKEVAREDHSQNDCFVLAVMSHGTEGKVY-AKDMS 141

 Worm   329 ISTHEIYDLLNAANAPRLANKPKIVFVQACRGERRD-----NGFPVLDSVDGVPAFLRRGWDNRD 388
            .....:::.....|...|.||||:.|:|||||...:     :.|.|: :.:.||           
  Fly   142 YPVERLWNPFLGDNCKTLKNKPKLFFIQACRGANLEKAVEFSSFAVM-TRELVP----------- 194

 Worm   389 GPLFNFLGCVRP--QVQQVWRKKPSQADILIAYATTAQYVSWRNSARGSWFIQAVCEVFSTHA-- 449
                      .|  .||.:....||.||||:.|:|..::.|:||...||||||::|.|....|  
  Fly   195 ----------EPAAAVQPITYAIPSTADILVFYSTFDKFFSFRNVDDGSWFIQSLCRVLDQAAAN 249

 Worm   450 -----KDMDVVELLTEVNKKVACGFQT---SQGSNILKQMPEMTSRLLKKF 492
                 :.::::.|||.||:|||..:|:   ::..|.:|:||...|.|.|.|
  Fly   250 EAATPEGVELLRLLTAVNRKVAYEYQSNTKNEALNQMKEMPNFMSTLTKTF 300

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ced-3NP_001255708.1 CARD 2..90 CDD:128424
CASc 235..496 CDD:214521 82/276 (30%)
DecayNP_477462.1 CASc 54..302 CDD:237997 80/270 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162607
Domainoid 1 1.000 130 1.000 Domainoid score I3239
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 132 1.000 Inparanoid score I3180
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000242
OrthoInspector 1 1.000 - - mtm4766
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR10454
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.990

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