DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment rbm-34 and eIF4B

DIOPT Version :9

Sequence 1:	NP_502291.1	Gene:	rbm-34 / 178148	WormBaseID:	WBGene00008688	Length:	394	Species:	Caenorhabditis elegans
Sequence 2:	NP_001015319.1	Gene:	eIF4B / 3355041	FlyBaseID:	FBgn0020660	Length:	459	Species:	Drosophila melanogaster

Alignment Length:	139	Identity:	29/139 - (20%)
Similarity:	61/139 - (43%)	Gaps:	22/139 - (15%)

- Green bases have known domain annotations that are detailed below.

Worm   249 FVGNLPFEITEDALITFFSAQIGPVEAVRIV------RDKDTGKGKGFAFVNFKQDSSVSLALSM 307
            ::.||||:..||.|..||       |.:.::      .|.:.|:.:||.:|..:....:...||:
  Fly    83 YINNLPFDANEDDLYEFF-------EGINLISLRLPREDGENGRSRGFGYVELENREDLIHVLSL 140

Worm   308 ETIKMEKRDLRITKVMKKGHLTKIQTAKKRTSHGKKNQNEITGKLHK--------FKFSTKKERT 364
            ....::.|.:||....:....::.::.::....|....|..:|...:        |.:|:..||:
  Fly   141 PDPSIKGRRIRIELSNENDQQSRQKSNRRFDGFGNNGDNRDSGNWRRDSQNNGSNFGYSSNFERS 205

Worm   365 TEQNDRRAL 373
            ..: :|::|
  Fly   206 FNR-ERKSL 213

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
rbm-34	NP_502291.1	RRM1_RBM34	144..233	CDD:240840
rbm-34	NP_502291.1	RRM2_RBM34	247..320	CDD:240841	19/76 (25%)
eIF4B	NP_001015319.1	RRM	<72..268	CDD:223796	29/139 (21%)
eIF4B	NP_001015319.1	RRM_eIF4B	79..155	CDD:240848	20/78 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910