DRSC/TRiP Functional Genomics Resources

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Protein Alignment bre-5 and brn

DIOPT Version :10

Sequence 1:NP_001255612.1 Gene:bre-5 / 178142 WormBaseID:WBGene00000270 Length:322 Species:Caenorhabditis elegans
Sequence 2:NP_476901.1 Gene:brn / 31358 FlyBaseID:FBgn0000221 Length:325 Species:Drosophila melanogaster


Alignment Length:310 Identity:99/310 - (31%)
Similarity:160/310 - (51%) Gaps:25/310 - (8%)


- Green bases have known domain annotations that are detailed below.


 Worm    16 SSFQKLLIFTITIFLLWVL----GVVDKFRETSF-GDFSWPL--ETRNLQLRSKFTKYPQCKFSG 73
            |..:|||:..:.:..|.:|    |::....|.:| ..|.:||  :|.:....|...|:...:...
  Fly     3 SKHRKLLLRCLLVLPLILLVDYCGLLTHLHELNFERHFHYPLNDDTGSGSASSGLDKFAYLRVPS 67

 Worm    74 NGQKI-------IIIIIKSSAKNGPMRESVRKTWGVFRMIDGVEVMPIFIVGRVENMEIMRRIDV 131
            ...::       :.::|||:..|...||::|:|||.......|.:..:|::|..|:.|  :.:..
  Fly    68 FTAEVPVDQPARLTMLIKSAVGNSRRREAIRRTWGYEGRFSDVHLRRVFLLGTAEDSE--KDVAW 130

 Worm   132 ESEKYKDILAISDIDSYRNNTLKLFGAIDYAANPNQCSSPDFTFLVDDDYLVHIPNLVKF---AK 193
            ||.::.|||.....|:|.|||||....:.:|:  :|.:..:|...|||||.|...|::||   .:
  Fly   131 ESREHGDILQAEFTDAYFNNTLKTMLGMRWAS--DQFNRSEFYLFVDDDYYVSAKNVLKFLGRGR 193

 Worm   194 TKQKEELVYEGFVFDTSPFRLKIHKHSISLNEYPFSRYPPYVSAGAVFLTSETIARFRNSIRKLK 258
            ...:.||::.|.||.|||.|.|..|..:||.||||.|:||||:|||..|:.:.:.:...:...|.
  Fly   194 QSHQPELLFAGHVFQTSPLRHKFSKWYVSLEEYPFDRWPPYVTAGAFILSQKALRQLYAASVHLP 258

 Worm   259 MFPFDDVFTGILAKTVNVAATHNENFIFWCRRVSQKEWD--DGVIAVHGY 306
            :|.||||:.||:|....::..|.::|.|  .|.:.|..|  ..|||.|.:
  Fly   259 LFRFDDVYLGIVALKAGISLQHCDDFRF--HRPAYKGPDSYSSVIASHEF 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
bre-5NP_001255612.1 Galactosyl_T 93..282 CDD:473923 71/191 (37%)
brnNP_476901.1 Galactosyl_T 92..282 CDD:426415 71/193 (37%)

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