DRSC/TRiP Functional Genomics Resources

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Protein Alignment rib-1 and sotv

DIOPT Version :10

Sequence 1:NP_502180.1 Gene:rib-1 / 178080 WormBaseID:WBGene00004360 Length:382 Species:Caenorhabditis elegans
Sequence 2:NP_725536.1 Gene:sotv / 3772101 FlyBaseID:FBgn0029175 Length:717 Species:Drosophila melanogaster


Alignment Length:362 Identity:96/362 - (26%)
Similarity:180/362 - (49%) Gaps:34/362 - (9%)


- Green bases have known domain annotations that are detailed below.


 Worm    22 NPTIERK----QCTMSNCFDFSKCSTSK-KVYIHPMEKRFEESPQ------SVIYSKILKHFLES 75
            ||..|::    .||..:|.:..||...: ||||:|:::..:|...      |..|.:||:..|:|
  Fly    80 NPEAEQRARNVNCTFWDCLNIYKCEHDRLKVYIYPLQEFVDEQSDKTATTLSSEYFQILEAVLKS 144

 Worm    76 NHYTNDPNEACIFLLGIDTTDRDVRSQNYVKNVNDYIESLDPSVWNNGRNHLIFNFYHGTFPDYD 140
            .:||::|||||:||..:|..:::|..::.   ....:.|||  .|:.|.||:|||...|..|.|:
  Fly   145 RYYTSNPNEACLFLPSLDLLNQNVFDKHL---AGAALASLD--FWDRGANHIIFNMLPGGAPSYN 204

 Worm   141 DHNLNFDTGEAMIARASSSENNFIKVFDVSLPLFHENHPYEIKESKSERNDDRIENQRKYLVSFK 205
            . .|:.:|..|:|........::...|||::|::         ..:..|.......|||:|:...
  Fly   205 T-VLDVNTDNAIIFGGGFDSWSYRPGFDVAIPVW---------SPRLVRQHAHATAQRKFLLVVA 259

 Worm   206 GKRYVYGIGSGTRNLVHHLHNGDDIVMVTTCKHNNDWQVYQDDRCQRDNDEYDRWEYDELLANST 270
            ....:.......|.|  .|.:.:.::::..|: |.|..:    ||.. :..:...||..||:...
  Fly   260 QLNILPRFVRTLREL--SLAHSEQLLLLGACE-NLDLTM----RCPL-SQHHKSLEYPRLLSRGK 316

 Worm   271 FCLVPRGRRLGSFRFLETLRSGCVPVVISDSWILPFSETIDWNSAAIVVAERDALSIPELLMSTS 335
            |||:.|..|:|....:|.:...|:||:..|:::|||.:.|||:.|::.:.|.:..|:.:.|.:.|
  Fly   317 FCLLGRSLRMGQPDLVEIMSQHCIPVIAVDNYVLPFEDVIDWSLASVRIRENELHSVMQKLKAIS 381

 Worm   336 RRRVKELRESARNVYDAYLRSIQVISDHVLRIIFKRI 372
            ..::.|:::..:.::..|.:.::.::...|.::..||
  Fly   382 SVKIVEMQKQVQWLFSKYFKDLKTVTLTALEVLESRI 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
rib-1NP_502180.1 Exostosin 46..333 CDD:397245 82/292 (28%)
sotvNP_725536.1 Exostosin 106..380 CDD:397245 82/296 (28%)
Glyco_transf_64 455..696 CDD:430488
Blue background indicates that the domain is not in the aligned region.

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