DRSC/TRiP Functional Genomics Resources

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Protein Alignment DYNC1I1 and Sdic1

DIOPT Version :10

Sequence 1:NP_004402.1 Gene:DYNC1I1 / 1780 HGNCID:2963 Length:645 Species:Homo sapiens
Sequence 2:NP_524670.2 Gene:Sdic1 / 43984 FlyBaseID:FBgn0067861 Length:517 Species:Drosophila melanogaster


Alignment Length:521 Identity:251/521 - (48%)
Similarity:330/521 - (63%) Gaps:65/521 - (12%)


- Green bases have known domain annotations that are detailed below.


Human   148 LGVSKVTQVDFLPREVVSYSKETQT--------PLATHQSEEDEEDEEMVESKVGQDSELE---- 200
            |.|..|...:..|:|.:.|:|:|||        .:....::.|:|:..:.....|..|:|.    
  Fly    26 LSVYNVQATNIPPKETLVYTKQTQTTSTGGGNGDVLAFDAQGDDEESSLQNLGNGFTSKLPPGYL 90

Human   201 -----------------NQDKKQEVKEAPPRELTEEEKQQILHSEEFLIFFDRTIRVIERALAED 248
                             ...|:.|||: ...||:||:||.|:.||.|..|..|..|||||||:|:
  Fly    91 THGLPTVKDVAPAITPLEIKKETEVKK-EVNELSEEQKQMIILSENFQRFVVRAGRVIERALSEN 154

Human   249 SDIFFDYSGRELEEKDGDVQAGANLSFNRQFYDEHWSKHRVVTCMDWSLQYPELMVASYNNNEDA 313
            .||:.||.|....|:..|.::.|.||.||.||||.|||:|.:|.||||..:|||:|.||:|||::
  Fly   155 VDIYTDYIGGGDSEEANDERSHARLSLNRVFYDERWSKNRCITSMDWSTHFPELVVGSYHNNEES 219

Human   314 PHEPDGVALVWNMKFKKTTPEYVFHCQSSVMSVCFARFHPNLVVGGTYSGQIVLWDNRSHRRTPV 378
            |:|||||.:|||.||||:|||.||||||:|||.|||:|:|||::||||||||||||||..:|||:
  Fly   220 PNEPDGVVMVWNTKFKKSTPEDVFHCQSAVMSTCFAKFNPNLILGGTYSGQIVLWDNRVQKRTPI 284

Human   379 QRTPLSAAAHTHPVYCVNVVGTQNAHNLITVSTDGKMCSWSLDMLSTPQESMELVYNKSKPVAVT 443
            ||||||||||||||||:.:||||||||:|::|:|||:|||||||||.||:::||...:||.:|:|
  Fly   285 QRTPLSAAAHTHPVYCLQMVGTQNAHNVISISSDGKLCSWSLDMLSQPQDTLELQQRQSKAIAIT 349

Human   444 GMAFPTGDVNNFVVGSEEGTVYTACRHGSKAGIGEVFEGHQGPVTGINCHMAVGPIDFSHLFVTS 508
            .||||..::|:.|:|||:|.||:|.|||.::|:.||:|.|.||:|||:.|......||.|||:||
  Fly   350 SMAFPANEINSLVMGSEDGYVYSASRHGLRSGVNEVYERHLGPITGISTHYNQLSPDFGHLFLTS 414

Human   509 SFDWTVKLWTTKHNKPLYSFEDNADYVYDVMWSPVH----PALFACVDGMGRLDLWNLNNDTEVP 569
            |.|||:|||:.|..|||||||..      :.||||.    |.                      |
  Fly   415 SIDWTIKLWSLKDTKPLYSFEQY------IAWSPVRRQRPPG----------------------P 451

Human   570 TASVAIEGASALNRVRWAQAGKEVAVGDSEGRIWVYDVGE-LAVPHNDEWTRFARTLVEIRANRA 633
            ..:....||.||.|..|..:|  :.:||..|:::||||.| ||.|..|||:||...|.||:.|:.
  Fly   452 DKTQPRHGAPALRRDSWTPSG--LCIGDEAGKLYVYDVAENLAQPSRDEWSRFNTHLSEIKMNQG 514

Human   634 D 634
            |
  Fly   515 D 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
DYNC1I1NP_004402.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..58
Interaction with DCTN1. /evidence=ECO:0000250 2..123
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 96..125
Dynein_IC2 143..173 CDD:463291 10/32 (31%)
Interaction with DYNLT1. /evidence=ECO:0000269|PubMed:27502274 147..163 4/14 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 169..221 16/80 (20%)
WD 1 285..334 31/48 (65%)
WD40 repeat 291..337 CDD:293791 30/45 (67%)
WD40 <318..607 CDD:441893 159/292 (54%)
WD 2 338..378 30/39 (77%)
WD40 repeat 346..385 CDD:293791 29/38 (76%)
WD 3 387..428 31/40 (78%)
WD40 repeat 393..434 CDD:293791 28/40 (70%)
WD 4 437..477 21/39 (54%)
WD40 repeat 442..481 CDD:293791 20/38 (53%)
WD 5 482..527 25/44 (57%)
WD40 repeat 488..529 CDD:293791 24/40 (60%)
WD 6 530..570 5/43 (12%)
WD40 repeat 535..573 CDD:293791 6/41 (15%)
WD 7 576..615 18/39 (46%)
WD40 repeat 581..607 CDD:293791 9/25 (36%)
Sdic1NP_524670.2 Dynein_IC2 21..51 CDD:463291 9/24 (38%)
WD40 196..>445 CDD:475233 162/254 (64%)
WD40 repeat 196..245 CDD:293791 32/48 (67%)
WD40 repeat 251..289 CDD:293791 28/37 (76%)
WD40 repeat 298..337 CDD:293791 27/38 (71%)
WD40 repeat 349..386 CDD:293791 19/36 (53%)
WD40 repeat 393..435 CDD:293791 24/41 (59%)
Blue background indicates that the domain is not in the aligned region.

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