DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AGL and GDB1

DIOPT Version :10

Sequence 1:NP_000019.2 Gene:AGL / 178 HGNCID:321 Length:1532 Species:Homo sapiens
Sequence 2:NP_015510.1 Gene:GDB1 / 856314 SGDID:S000006388 Length:1536 Species:Saccharomyces cerevisiae


Alignment Length:1585 Identity:614/1585 - (38%)
Similarity:842/1585 - (53%) Gaps:216/1585 - (13%)


- Green bases have known domain annotations that are detailed below.


Human    46 VYTNYPFPGET-FNREKFRSLDWENPTEREDDSDKYCKLNLQQSGSFQYY--FLQGNEK---SGG 104
            |:||.|....| |.|:||......:....:|..|    ||:...||:.:|  |...|||   :..
Yeast    62 VWTNCPPDHNTPFKRDKFYKKIIHSSFHEDDCID----LNVYAPGSYCFYLSFRNDNEKLETTRK 122

Human   105 GYIVVDPILRVGADNHVLPLDCVTLQTFLAKCLGPFDEWESRLRVAKESGYNMIHFTPLQTLGLS 169
            .|.|..|:|.:  ::..|||:.:.||:.::|.||  .:||..|.......|||:||||||..|.|
Yeast   123 YYFVALPMLYI--NDQFLPLNSIALQSVVSKWLG--SDWEPILSKIAAKNYNMVHFTPLQERGES 183

Human   170 RSCYSLANQLELNPD-FSRPNRKYTWNDVGQLVEKLKKEWNVICITDVVYNHTAANSKWIQEHPE 233
            .|.||:.:||:.:.: |..|      .||..|||.:.::.|::.:||:|:||||.||.|:.||||
Yeast   184 NSPYSIYDQLQFDQEHFKSP------EDVKNLVEHIHRDLNMLSLTDIVFNHTANNSPWLVEHPE 242

Human   234 CAYNLVNSPHLKPAWVLDRALWRFSCDVAEGKYKEKGIPALIENDHHMNSIRKIIWEDIFPKLKL 298
            ..||.:.:|||..|..||:.|..||.::     |..|.|..::|...:..|...|...:...|||
Yeast   243 AGYNHITAPHLISAIELDQELLNFSRNL-----KSWGYPTELKNIEDLFKIMDGIKVHVLGSLKL 302

Human   299 WEFFQVDVNKAVEQFRRLLTQ---------ENRRVTKSDPNQHLTIIQD----PEYRRFGCTVDM 350
            ||::.|:|..|:...:.....         ||.:...||..:..:.::|    |.:...|.....
Yeast   303 WEYYAVNVQTALRDIKAHWNDESNESYSFPENIKDISSDFVKLASFVKDNVTEPNFGTLGERNSN 367

Human   351 NIALTTFIP-----HDKGPAAIEECCNWFHKRMEELNSEKHRLINYHQEQAVNCLLGNVFYERLA 410
            .|.:..||.     :|.|....|.........:.|:|...:|..:....:.:..|...:.|.||.
Yeast   368 RINVPKFIQLLKLINDGGSDDSESSLATAQNILNEVNLPLYREYDDDVSEILEQLFNRIKYLRLD 432

Human   411 GHGPKLGPVTRKHPLVTRYFTFPFEEIDFSMEESMIHLPNKACFLMAHNGWVMGDDPLRNFAEPG 475
            ..|||.||||...||...||| .|:..|            ...:.:|:|||:...:||.:||...
Yeast   433 DGGPKQGPVTVDVPLTEPYFT-RFKGKD------------GTDYALANNGWIWNGNPLVDFASQN 484

Human   476 SEVYLRRELICWGDSVKLRYGNKPEDCPYLWAHMKKYTEITATYFQGVRLDNCHSTPLHVAEYML 540
            |..|||||:|.|||.||||||..|||.||||..|.||.|:.|..|.|.|:|||||||:||.||.|
Yeast   485 SRAYLRREVIVWGDCVKLRYGKSPEDSPYLWERMSKYIEMNAKIFDGFRIDNCHSTPIHVGEYFL 549

Human   541 DAARNLQPNLYVVAELFTGSEDLDNVFVTRLGISSLIREAMSAYNSHEEGRLVYRYGGEPVGS-- 603
            |.||...||||||||||:|||.||.:||.||||||||||||.|::..|..|||:::||.|:||  
Yeast   550 DLARKYNPNLYVVAELFSGSETLDCLFVERLGISSLIREAMQAWSEEELSRLVHKHGGRPIGSYK 614

Human   604 ------FVQP--------------------CLRPLM-PAI-----AHALFMDITHDNECPIVHRS 636
                  |..|                    |:..:| |.|     .||||||.|||||.|...|:
Yeast   615 FVPMDDFSYPADINLNEEHCFNDSNDNSIRCVSEIMIPKILTATPPHALFMDCTHDNETPFEKRT 679

Human   637 AYDALPSTTIVSMACCASGSTRGYDELVPHQISVVSEERFYTKWNPEALPSNTGEVNFQSGIIAA 701
            ..|.||:..:|::...|.||..||||:.||.:::|:|:|.|....|...||        .||...
Yeast   680 VEDTLPNAALVALCSSAIGSVYGYDEIFPHLLNLVTEKRHYDISTPTGSPS--------IGITKV 736

Human   702 RCAISKLHQELGAKGFIQVYVDQVDEDIVAVTRHSPSI--HQSVVAVSRTAFRNPKTSFYSKEVP 764
            :..::.:...:|.|.:      .:::..:.|......|  |:..|...:..:...:..|...:.|
Yeast   737 KATLNSIRTSIGEKAY------DIEDSEMHVHHQGQYITFHRMDVKSGKGWYLIARMKFSDNDDP 795

Human   765 QMCIPGKIEEVVLEART--------IERNTKPYRKDENSINGTPDITVEIRE-HIQLNESKIVKQ 820
            ...:|    .|||...|        :||.......|:..|.|.|....|:.. .|..::||.:. 
Yeast   796 NETLP----PVVLNQSTCSLRFSYALERVGDEIPNDDKFIKGIPTKLKELEGFDISYDDSKKIS- 855

Human   821 AGVATKGPNEYIQEIEFENLSPGSVIIFRVSLDPHAQVAVGILRNHLTQFSPHF-KSGSLAVDNA 884
               ..|.|||:.|         ||:.||...            :|.:.:...|| :||:|     
Yeast   856 ---TIKLPNEFPQ---------GSIAIFETQ------------QNGVDESLDHFIRSGAL----- 891

Human   885 DPILKIPFASLASRLTLAELNQILYRCESEEKE---DGGGCYDIPNWSALKYAGLQGLMSVLAEI 946
                     ...|.|||..:|.:|||.|.||.:   ..||.|.|||:....|.||||.:|||.:|
Yeast   892 ---------KATSSLTLESINSVLYRSEPEEYDVSAGEGGAYIIPNFGKPVYCGLQGWVSVLRKI 947

Human   947 RPKNDLGHPFCNNLRSGDWMIDYVSNRL--ISRSGTIAEVGKWLQAMFFYLKQIPRYLIPCYFDA 1009
            ...|||.||...|||:|.|.:||..:||  .|....|.||..||::.|..:|::|.||:|.|| |
Yeast   948 VFYNDLAHPLSANLRNGHWALDYTISRLNYYSDEAGINEVQNWLRSRFDRVKKLPSYLVPSYF-A 1011

Human  1010 ILIG-AYTTLLDTAWKQMSSFVQNGSTFVKHLSLGSVQLCGVGKFPSLPILSPALMDVPYRLNEI 1073
            ::|| .|......|.:.||..:...:.||:.||:.|:|:  |.:..|..||...  :||      
Yeast  1012 LIIGILYGCCRLKAIQLMSRNIGKSTLFVQSLSMTSIQM--VSRMKSTSILPGE--NVP------ 1066

Human  1074 TKEKEQCCVSLAAGLPHFSSGIFRCWGRDTFIALRGILLITGRYVEARNIILAFAGTLRHGLIPN 1138
                     |:||||||||....||||||.||:|||:||.|||:.||:..|||||.||:||||||
Yeast  1067 ---------SMAAGLPHFSVNYMRCWGRDVFISLRGMLLTTGRFDEAKAHILAFAKTLKHGLIPN 1122

Human  1139 LLGEGIYARYNCRDAVWWWLQCIQDYCKMVPNGLDILKCPVSRMYPTDDSAPLPAGTLDQP---- 1199
            ||..|...|||.|||.|::||.:|||..:||:|..||:..|:|.:|.||:. :|   :|.|    
Yeast  1123 LLDAGRNPRYNARDAAWFFLQAVQDYVYIVPDGEKILQEQVTRRFPLDDTY-IP---VDDPRAFS 1183

Human  1200 ----LFEVIQEAMQKHMQGIQFRERNAGPQIDRNMKDEGFNITAGVDEETGFVYGGNRFNCGTWM 1260
                |.|:|.|.:.:|.:||:|||.||||.:||.|.|:|||:...||..||.::||:::||||||
Yeast  1184 YSSTLEEIIYEILSRHAKGIKFREANAGPNLDRVMTDKGFNVEIHVDWSTGLIHGGSQYNCGTWM 1248

Human  1261 DKMGESDRARNRGIPATPRDGSAVEIVGLSKSAVRWLLELSKKNIFPYHEVTVKRHGKAIKVSYD 1325
            ||||||::|.:.|||.|||||:|:||.||.|||:|:::||..|.:|.:.:|..:..|   ::.:.
Yeast  1249 DKMGESEKAGSVGIPGTPRDGAAIEINGLLKSALRFVIELKNKGLFKFSDVETQDGG---RIDFT 1310

Human  1326 EWNRKIQDNFEKLFHVSEDPS-----DLNEKHPNLVHKRGIYKDSYGASSPWCDYQLRPNFTIAM 1385
            |||:.:||||||.::|.||||     |::.|..  |::||||:|.|.:..|:.||||||||.|||
Yeast  1311 EWNQLLQDNFEKRYYVPEDPSQDADYDVSAKLG--VNRRGIYRDLYKSGKPYEDYQLRPNFAIAM 1373

Human  1386 VVAPELFTTEKAWKALEIAEKKLLGPLGMKTLDPDDMVYCGIYDNALDNDNYNLAKGFNYHQGPE 1450
            .||||||..|.|.||:.||::.|.||:||:||||.|..|...|:|..|:|::..:||.|||||||
Yeast  1374 TVAPELFVPEHAIKAITIADEVLRGPVGMRTLDPSDYNYRPYYNNGEDSDDFATSKGRNYHQGPE 1438

Human  1451 WLWPIGYFLRAKLYFSRLMGP--ETTAK---TIVLVKNV---LSRHYVHLERSPWKGLPELTNEN 1507
            |:|..||||||..:|.....|  :..||   :..|.:.:   |..|...:..|.|.||.||||::
Yeast  1439 WVWLYGYFLRAFHHFHFKTSPRCQNAAKEKPSSYLYQQLYYRLKGHRKWIFESVWAGLTELTNKD 1503

Human  1508 AQYCPFSCETQAWSIATILETLYDL 1532
            .:.|..|..|||||.|.:|:..|||
Yeast  1504 GEVCNDSSPTQAWSSACLLDLFYDL 1528

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AGLNP_000019.2 glyc_debranch 22..1532 CDD:273673 612/1583 (39%)
GDB1NP_015510.1 glyc_debranch 26..1528 CDD:273673 612/1583 (39%)

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