DRSC/TRiP Functional Genomics Resources

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Protein Alignment M03D4.4 and Kr-h1

DIOPT Version :9

Sequence 1:NP_001023313.1 Gene:M03D4.4 / 177375 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans
Sequence 2:NP_477466.1 Gene:Kr-h1 / 33861 FlyBaseID:FBgn0266450 Length:845 Species:Drosophila melanogaster


Alignment Length:437 Identity:104/437 - (23%)
Similarity:158/437 - (36%) Gaps:143/437 - (32%)


- Green bases have known domain annotations that are detailed below.


 Worm    79 KSSSGEKGRYECEDCHEMFAVKRELATHMRIHSGEQPHSCTQCGKEFGTRQLLKKHWMWHTGERS 143
            ::.:||: .:|||.||::|:||..|..|.|||:.|:|:.|..||:.|.....|.:|...|||||.
  Fly   291 RTHTGER-PFECEFCHKLFSVKENLQVHRRIHTKERPYKCDVCGRAFEHSGKLHRHMRIHTGERP 354

 Worm   144 HVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQ--CHKTFIFKFDLNRHMKIHQ-ERGFSCQQCG 205
            |.|..|.|.|.|.|.|..|:..|:|.:|::||:  |.|.|.....|..|.:.|. |:.:.|..|.
  Fly   355 HKCSVCEKTFIQSGQLVIHMRTHTGEKPYKCPEPGCGKGFTCSKQLKVHSRTHTGEKPYHCDICF 419

 Worm   206 RSFLKQVMLDEHHLKCKGKPSSPIRSLLTPTMKAGLESAISIKPPQESMILSSETIAKMAQKLLI 270
            |.|....:|..|.:                                                   
  Fly   420 RDFGYNHVLKLHRV--------------------------------------------------- 433

 Worm   271 QQQENHRNALNTLLVKQHENILNNNNNNESNILNGSVMHKDAGFEIPAPTIPLSLTCMICKSQFN 335
                            ||               .||..:|                |.||...|.
  Fly   434 ----------------QH---------------YGSKCYK----------------CTICDETFK 451

 Worm   336 SQPSFTLHMYMHHIANQNPNLSIDSTHIHHTHQPTTISHQNDPTPLG-SDSDLATDTSCASSPQK 399
            ::.....|:..|  ||:.|:...::.........:..|....|:..| |.:..:::.|..|||..
  Fly   452 NKKEMEAHIKGH--ANEVPDDEAEAAAASAAASTSAGSSAGSPSLQGVSSNSESSNHSPPSSPPA 514

 Worm   400 T----------------SPLQLLESSCLEQSSV----SPSSSSGASPQPTAS------------- 431
            |                :.|.:..||.|..||:    |||:||.|||.||::             
  Fly   515 TKKPRQARQPRVSKTVAATLSIPTSSPLSPSSLSSTYSPSASSMASPPPTSAHYLPVQMEADALS 579

 Worm   432 -ESSTSSCKDCTNSW--QRVHDLEQQMVKKD--EEFENYKQMTKQII 473
             :|..||.:...:::  :...||..|.|:..  |...:|.|....::
  Fly   580 RDSGVSSAQPAHSTYADEEPTDLSMQQVQGQLPESTVDYYQAPPSLL 626

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 10/19 (53%)
zf-H2C2_2 102..127 CDD:290200 11/24 (46%)
C2H2 Zn finger 118..138 CDD:275368 6/19 (32%)
C2H2 Zn finger 146..166 CDD:275368 8/19 (42%)
zf-H2C2_2 158..181 CDD:290200 9/24 (38%)
zf-C2H2 172..194 CDD:278523 7/23 (30%)
C2H2 Zn finger 174..194 CDD:275368 7/21 (33%)
Kr-h1NP_477466.1 C2H2 Zn finger 196..216 CDD:275368
COG5048 <270..420 CDD:227381 51/129 (40%)
zf-C2H2 271..293 CDD:278523 0/1 (0%)
C2H2 Zn finger 273..293 CDD:275368 0/1 (0%)
zf-H2C2_2 286..309 CDD:290200 7/18 (39%)
C2H2 Zn finger 301..321 CDD:275368 10/19 (53%)
zf-H2C2_2 313..338 CDD:290200 11/24 (46%)
C2H2 Zn finger 329..349 CDD:275368 6/19 (32%)
zf-H2C2_2 344..366 CDD:290200 11/21 (52%)
C2H2 Zn finger 357..377 CDD:275368 8/19 (42%)
zf-H2C2_2 370..396 CDD:290200 10/25 (40%)
C2H2 Zn finger 385..407 CDD:275368 7/21 (33%)
zf-H2C2_2 400..424 CDD:290200 8/23 (35%)
C2H2 Zn finger 415..435 CDD:275368 6/86 (7%)
zf-C2H2 441..463 CDD:278523 6/37 (16%)
C2H2 Zn finger 443..463 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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