DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msx2 and tin

DIOPT Version :10

Sequence 1:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus
Sequence 2:NP_524433.1 Gene:tin / 42536 FlyBaseID:FBgn0004110 Length:416 Species:Drosophila melanogaster


Alignment Length:223 Identity:70/223 - (31%)
Similarity:100/223 - (44%) Gaps:37/223 - (16%)


- Green bases have known domain annotations that are detailed below.


Mouse    22 AGPGPGPGGAEGSAEERRVKVSSLPF---------SVEALMSDKKPPKESPAVPP------DCAS 71
            ||.|...|||..||...:.:....|:         :..|.:...:.|.:...|.|      :.||
  Fly   184 AGSGEVYGGATPSAVGIKSEYIPTPYVTPSPTLDLNSSAEVDSLQAPTQKLCVNPLSQRLMETAS 248

Mouse    72 AGAVLRPLLLPGHGVRDAHSPGPLVKPFETASVKSENSEDGAPWIQEPGRYSPPPRHMSPTTCTL 136
            ..:.||.:.....|.:...:.       :..|.:||..::.......||..|..           
  Fly   249 NSSSLRSIYGSDEGAKKKDNS-------QVTSSRSELRKNSISGNSNPGSNSGS----------- 295

Mouse   137 RKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQ 201
            .|.:..||||..|:.:|:|.||.:||.|:||:.|||...:..|||:.|||||||||||.|:||..
  Fly   296 TKPRMKRKPRVLFSQAQVLELECRFRLKKYLTGAEREIIAQKLNLSATQVKIWFQNRRYKSKRGD 360

Mouse   202 ---EAELEKLKMAAKPMLPSGFSLPFPI 226
               |...:.||:.::| |.|..|||.||
  Fly   361 IDCEGIAKHLKLKSEP-LDSPTSLPPPI 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 8/19 (42%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 5/27 (19%)
Homeodomain 143..199 CDD:459649 32/55 (58%)
tinNP_524433.1 Homeodomain 302..358 CDD:459649 32/55 (58%)

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