Protein Alignment Msx2 and Ubx

DIOPT Version :10

• Sequence 1: NP_038629.2
• Gene: Msx2 / 17702
• MGIID: 97169
• Length: 267
• Species: Mus musculus
• Sequence 2: NP_536752.1
• Gene: Ubx / 42034
• FlyBaseID: FBgn0003944
• Length: 389
• Species: Drosophila melanogaster
• Alignment Length: 254
• Identity: 59/254 - (23%)
• Similarity: 85/254 - (33%)
• Gaps: 62/254 - (24%)

Mouse    17 GPAVLAGPGPGPGGAEGSAEERRVKVSSLPFSVEALMSDKK------PPKESP------------ 63
            |.....|.|...||...:|..:......:|....|...|.:      ....||
  Fly   123 GAGGTGGAGNANGGNAANANGQNNPAGGMPVRPSACTPDSRVGGYLDTSGGSPVSHRGGSAGGNV 187

Mouse    64 AVPPDCASAGAVLRPLLLPGHGV---RDAHSPGPLVKPFETASVKSENSEDGAPWIQEPGRYSPP 125
            :|.....:||.|...:.:.|.|.   .:....|...:....:|:...::....||:...|....
  Fly   188 SVSGGNGNAGGVQSGVGVAGAGTAWNANCTISGAAAQTAAASSLHQASNHTFYPWMAIAGECPE- 251

Mouse   126 PRHMSPTTCTLRKHKT-------------------------------NRKPRTPFTTSQLLALER 159
                .||...:|...|                               .|:.|..:|..|.|.||:
  Fly   252 ----DPTKSKIRSDLTQYGGISTDMGKRYSESLAGSLLPDWLGTNGLRRRGRQTYTRYQTLELEK 312

Mouse   160 KFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEA-----ELEKLKMAAK 213
            :|....||:...|.|.:.:|.|||.|:||||||||.|.|:..:|     |.||...|.|
  Fly   313 EFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKEIQAIKELNEQEKQAQAQK 371

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Msx2	NP_038629.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..42		6/24 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	104..132		3/27 (11%)
		Homeodomain	143..199	CDD:459649	26/55 (47%)
Ubx	NP_536752.1	Homeodomain	296..352	CDD:459649	26/55 (47%)