Protein Alignment Msx2 and Scr

DIOPT Version :10

• Sequence 1: NP_038629.2
• Gene: Msx2 / 17702
• MGIID: 97169
• Length: 267
• Species: Mus musculus
• Sequence 2: NP_001368995.1
• Gene: Scr / 40833
• FlyBaseID: FBgn0003339
• Length: 564
• Species: Drosophila melanogaster
• Alignment Length: 265
• Identity: 70/265 - (26%)
• Similarity: 110/265 - (41%)
• Gaps: 56/265 - (21%)

Mouse    11 FSSDEEGPAVLAGPGPGPGGAEG------SAEERRVKVSSLPFSVEALMSDKKPPKESPAVPPDC 69
            :::|...|.     |.|.||..|      ||........||. |.:.|.:....||.||:
  Fly   169 YANDPVTPG-----GSGGGGVSGSNNNNNSANSNNNNSQSLA-SPQDLSTRDISPKLSPS----- 222

Mouse    70 ASAGAVLRPL---LLPGH--------GVRDAHS-------PGPLVKPF------ETASVKSENSE 110
            :...:|.|.|   :|.|.        |:.:.||       ||.:..|.      ::.|.....:|
  Fly   223 SVVESVARSLNKGVLGGSLAAAAAAAGLNNNHSGSGVSGGPGNVNVPMHSPGGGDSDSESDSGNE 287

Mouse   111 DGAPWIQEPGRYSPPP-----RHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIA 170
            .|:......|:.:||.     :.:...|.|:..:...::.||.:|..|.|.||::|...:||:..
  Fly   288 AGSSQNSGNGKKNPPQIYPWMKRVHLGTSTVNANGETKRQRTSYTRYQTLELEKEFHFNRYLTRR 352

Mouse   171 ERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSGFSLPFPINSPLQAASI 235
            .|.|.:.:|.|||.|:||||||||.|.|:       :.|||:..::|....   |...|.....|
  Fly   353 RRIEIAHALCLTERQIKIWFQNRRMKWKK-------EHKMASMNIVPYHMG---PYGHPYHQFDI 407

Mouse   236 YGASY 240
            :.:.:
  Fly   408 HPSQF 412

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Msx2	NP_038629.2	Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	1..42		9/36 (25%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	104..132		5/32 (16%)
		Homeodomain	143..199	CDD:459649	26/55 (47%)
Scr	NP_001368995.1	Homeodomain	325..381	CDD:459649	26/55 (47%)