DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msx2 and Dfd

DIOPT Version :10

Sequence 1:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus
Sequence 2:NP_477201.1 Gene:Dfd / 40832 FlyBaseID:FBgn0000439 Length:586 Species:Drosophila melanogaster


Alignment Length:291 Identity:71/291 - (24%)
Similarity:106/291 - (36%) Gaps:96/291 - (32%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 GGDLFSSDEEGPAVLAGPGPGPGGAEGS-------AEERRVKVSSLPFSVEALMSDKKPPKES-- 62
            ||........|  ...|.|.|.|.|.||       ......::..||..    .|..:||..:  
  Fly   199 GGGAVGGSANG--YYGGYGGGYGTANGSVGSTHSQGHSPHSQMMDLPLQ----CSSTEPPTNTAL 257

Mouse    63 --------------PAVPPDCASAGAVLRPLLLPGHGVR-----------DAHSPGPLV---KPF 99
                          .|||     ||..|:.|     |:|           |......|:   .|.
  Fly   258 GLQELGLKLEKRIEEAVP-----AGQQLQEL-----GMRLRCDDMGSENDDMSEEDRLMLDRSPD 312

Mouse   100 ETASVKSEN--------------SEDGA----PWIQE-------PGRYSPPPRHMSPTTCTLRKH 139
            |..|..:::              :.||.    ||:::       .|.|.|   .|.|        
  Fly   313 ELGSNDNDDDLGDSDSDEDLMAETTDGERIIYPWMKKIHVAGVANGSYQP---GMEP-------- 366

Mouse   140 KTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEAE 204
               ::.||.:|..|:|.||::|...:||:...|.|.:.:|.|:|.|:||||||||.|.|:  :.:
  Fly   367 ---KRQRTAYTRHQILELEKEFHYNRYLTRRRRIEIAHTLVLSERQIKIWFQNRRMKWKK--DNK 426

Mouse   205 LEKLKMAAKPMLPSGFSLPFPI-NSPLQAAS 234
            |...|...|..:.:..: |.|: ..|.:.|:
  Fly   427 LPNTKNVRKKTVDANGN-PTPVAKKPTKRAA 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 10/41 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 8/52 (15%)
Homeodomain 143..199 CDD:459649 25/55 (45%)
DfdNP_477201.1 Homeodomain 367..423 CDD:459649 25/55 (45%)

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