DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msx2 and inv

DIOPT Version :10

Sequence 1:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus
Sequence 2:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster


Alignment Length:275 Identity:66/275 - (24%)
Similarity:98/275 - (35%) Gaps:80/275 - (29%)


- Green bases have known domain annotations that are detailed below.


Mouse     7 GGDLFSSDEEGPAVLAG-------PGPGP---GGAEGSAEERRVKVSSLPF--SVEALMSDKKPP 59
            ||...|....|.:..:|       |...|   |.....|:......|||.|  |:..:.|:....
  Fly   304 GGGSVSGSSTGSSKNSGNTNGNRSPLKAPKKSGKPLNLAQSNAAANSSLSFSSSLANICSNSNDS 368

Mouse    60 KESPAVPPDCASAGAVLRPLLLPGHGVRDAHSPGPLVKPFETASVKSENSEDGAP-----WIQEP 119
            ..:........::||   |:.|       ..||.|......|.:......:.|.|     |:. .
  Fly   369 NSTATSSSTTNTSGA---PVDL-------VKSPPPAAGAGATGASGKSGEDSGTPIVWPAWVY-C 422

Mouse   120 GRYSP-PPRHMSPTTCTLRKHKT-------------------------NRKPRTPFTTSQLLALE 158
            .|||. |....||.....:|..|                         :::|||.|:.:||..|:
  Fly   423 TRYSDRPSSGRSPRARKPKKPATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLK 487

Mouse   159 RKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKR------------------------ 199
            .:|.:.:||:...|.:.|..|.|.|.|:||||||:|||.|:                        
  Fly   488 HEFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKSSGTKNPLALQLMAQGLYNHSTIP 552

Mouse   200 --LQEAELEKLKMAA 212
              .:|.||::|:.||
  Fly   553 LTREEEELQELQEAA 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 9/44 (20%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 8/33 (24%)
Homeodomain 143..199 CDD:459649 25/55 (45%)
invNP_523699.3 Homeodomain 472..528 CDD:459649 25/55 (45%)
Engrail_1_C_sig 529..554 CDD:431338 0/24 (0%)

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