DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msx2 and bsh

DIOPT Version :10

Sequence 1:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus
Sequence 2:NP_477350.2 Gene:bsh / 35266 FlyBaseID:FBgn0000529 Length:429 Species:Drosophila melanogaster


Alignment Length:254 Identity:73/254 - (28%)
Similarity:107/254 - (42%) Gaps:48/254 - (18%)


- Green bases have known domain annotations that are detailed below.


Mouse    11 FSSDEEGPAVLAGPGPGPGGAEGSAEERRVKVSSLPFSVEALMSDKKPP-----KESPAVPPDCA 70
            ::.::.|.::.:.|........|::.....::|....|..|    :.||     .:.|..||...
  Fly   134 YAGEDYGKSMHSTPRSNHHSRHGTSHYNGDQISQQLGSGAA----QHPPVPTTQPQPPPPPPLNG 194

Mouse    71 SAGA---VLRP---------------LLLPGHGVRDAHSPGPLVKPF--ETASVKSENSEDGAPW 115
            .:||   ||.|               .|.|..|...:      |.|:  ..||:..     |||:
  Fly   195 GSGASNGVLYPNAPYTDHGFLQMTLGYLSPSSGTYKS------VDPYFLSQASLFG-----GAPF 248

Mouse   116 IQEPGRYSPPPRHMSPTTCTLRKHKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLN 180
            ...||........:......|| |...||.||.|:..||..||::|..::|||..||.|.:::|.
  Fly   249 FGAPGCVPELALGLGMGVNALR-HCRRRKARTVFSDPQLSGLEKRFEGQRYLSTPERVELATALG 312

Mouse   181 LTETQVKIWFQNRRAKAKRLQEAELEKLKMAAKPMLPSGFSLPFPINSPLQAASIYGAS 239
            |:|||||.||||||.|.|:    :|.:...|.:|:   .||...|...|.:|.|..|.|
  Fly   313 LSETQVKTWFQNRRMKHKK----QLRRRDNANEPV---DFSRSEPGKQPGEATSSSGDS 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42 3/30 (10%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 5/27 (19%)
Homeodomain 143..199 CDD:459649 30/55 (55%)
bshNP_477350.2 Homeodomain 275..331 CDD:459649 30/55 (55%)

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