DRSC/TRiP Functional Genomics Resources

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Protein Alignment Msx2 and B-H2

DIOPT Version :10

Sequence 1:NP_038629.2 Gene:Msx2 / 17702 MGIID:97169 Length:267 Species:Mus musculus
Sequence 2:NP_523386.1 Gene:B-H2 / 32723 FlyBaseID:FBgn0004854 Length:645 Species:Drosophila melanogaster


Alignment Length:211 Identity:59/211 - (27%)
Similarity:90/211 - (42%) Gaps:38/211 - (18%)


- Green bases have known domain annotations that are detailed below.


Mouse    83 GHGVRDAHSPGPLVKPFETASVKSENSEDGAPWIQEPGRYSPPPRHM---------SPTTCTLRK 138
            |:|......||..:...:.:::...:|:|..      |:.......|         |.:..:|..
  Fly   318 GNGNMLLGGPGSSISGDQASTIDDSDSDDCG------GKDDDGDDSMKNGSSANGDSSSHLSLSL 376

Mouse   139 HKTNRKPRTPFTTSQLLALERKFRQKQYLSIAERAEFSSSLNLTETQVKIWFQNRRAKAKRLQEA 203
            .|..||.||.||..||..||:.|.:::|||:.:|.|.::.|.|::.|||.|:||||.|.||....
  Fly   377 SKKQRKARTAFTDHQLQTLEKSFERQKYLSVQDRMELANKLELSDCQVKTWYQNRRTKWKRQTAV 441

Mouse   204 ELEKLKMA------------AKPMLPSGFSLPFPINSPLQAASIYGASYP-----FHRPVLPIPP 251
            .||.|..|            |.|.|.:     :|..:...|.|.:||: |     ::|.......
  Fly   442 GLELLAEAGNYAAFQRLYGGATPYLSA-----WPYAAAAAAQSPHGAT-PSAIDIYYRQAAAAAA 500

Mouse   252 VGLYATPVGYGMYHLS 267
            :...:.|..|.||..|
  Fly   501 MQKPSLPASYRMYQSS 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Msx2NP_038629.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..42
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 104..132 5/36 (14%)
Homeodomain 143..199 CDD:459649 27/55 (49%)
B-H2NP_523386.1 Homeodomain 381..437 CDD:459649 27/55 (49%)
Blue background indicates that the domain is not in the aligned region.

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