DRSC/TRiP Functional Genomics Resources

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Protein Alignment dsl-1 and NimA

DIOPT Version :9

Sequence 1:NP_500054.1 Gene:dsl-1 / 176939 WormBaseID:WBGene00001103 Length:252 Species:Caenorhabditis elegans
Sequence 2:NP_001285918.1 Gene:NimA / 318930 FlyBaseID:FBgn0261514 Length:565 Species:Drosophila melanogaster


Alignment Length:224 Identity:52/224 - (23%)
Similarity:73/224 - (32%) Gaps:62/224 - (27%)


- Green bases have known domain annotations that are detailed below.


 Worm    19 GYMTIRLKSAFPL----NVTVEVAEEVYFPTNKRSFNLQLKPNRVGFVSNIPVKFGRPGLVLVDC 79
            |.:.:.|....||    |.|:::             |..:|....|.|: :|...| ||.:.:..
  Fly     8 GKLLLLLAMVLPLGSGQNSTLKI-------------NTNVKDIEAGVVA-LPSIQG-PGNICIRE 57

 Worm    80 SP-VEKFQI---HRVTLRSIRW-----------NTHVRSVASDNIFLPFTGFRYDIKCNRYWHGL 129
            .| ||..|:   ..|.:|:..|           .|.:|.|............|:  .|..|...|
  Fly    58 EPYVEHVQVPEMQPVRVRTSSWCMEIPPRCATFKTEMREVMRVQKLNKTRTVRF--CCQGYEGNL 120

 Worm   130 H-----CDHFCNDDFARTINRRCTQNGTLGCLEGFHGPNCELPVPADS--------CKCQNGGKC 181
            .     |...|.....|   ..|.......|.||:.|.:|......|.        |:||||..|
  Fly   121 SDSQATCKPICRGGCGR---GSCVMPDICSCEEGYIGKHCTQRCDHDRWGLDCKNLCQCQNGAAC 182

 Worm   182 VSSLENTWAQNGSLICECRLGHFEGKHCE 210
                     .|.|.:|.|..| :.|:.||
  Fly   183 ---------DNKSGLCHCIAG-WTGQFCE 201

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
dsl-1NP_500054.1 DSL 112..164 CDD:302925 12/56 (21%)
EGF_CA <175..210 CDD:238011 11/34 (32%)
NimANP_001285918.1 EMI 52..116 CDD:284877 12/65 (18%)
EGF_2 170..200 CDD:285248 12/39 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1218
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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