DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cct-8 and CCT8

DIOPT Version :9

Sequence 1:NP_500035.3 Gene:cct-8 / 176928 WormBaseID:WBGene00021934 Length:548 Species:Caenorhabditis elegans
Sequence 2:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster


Alignment Length:550 Identity:301/550 - (54%)
Similarity:408/550 - (74%) Gaps:10/550 - (1%)


- Green bases have known domain annotations that are detailed below.


 Worm     1 MAMKIPKS-GYNRFMKEGAQHFKGTDEAVQRNIEACTELASQIRSAYGPNGMNKMVINHIEKLFV 64
            ||:.:||: |.::.:|:||:.:.|.:|||.|||.||.|.|..:||||||||||||:||||||.||
  Fly     1 MALSVPKAPGVSQMLKDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFV 65

 Worm    65 TNDAATILKELEIQHPAARIIIMATEMQEKQIGDNTNTVVILAAALLEHAANLIHMGMTPQEVAA 129
            |:||.||::||:::||||::|:||::||:.::||.||.||:||.||||.|..|:.:|:|..|::.
  Fly    66 TSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISD 130

 Worm   130 GYEQAAEKALEILPTLVVKEATDMKNIEEVRQYIRSAITSKQYDNEDIIADLVAKACVTTCPANS 194
            |||:|.||||||||.||..:..|.:|:|:|::.:|::|.||||..||.:.|||:||||:..| :.
  Fly   131 GYEKALEKALEILPNLVSHKIEDYRNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILP-DE 194

 Worm   195 FNFNVDNIRICKIIGSGVHTSTVMNGMVFKRGAEGEIREARDARIAVYTCPFDLTQTETKGTVLI 259
            ..|||||||||||:|||:..|.|:.||||||..||::..|..|:|.:::||.|:.||||||||||
  Fly   195 GTFNVDNIRICKILGSGLTKSEVVRGMVFKRFVEGDVTYAEKAKIVIFSCPVDIIQTETKGTVLI 259

 Worm   260 ENADELRNFSKGEEAEVEEQVKAIADNGVKVVVAAGKFGDMYLHFLNKYKIMAVRLTSKFDLRRL 324
            ::||||.:||.|||:.:|.|:|||||.|||||||.||.|||.|||||||.:|||||.||||||||
  Fly   260 KSADELLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAVRLNSKFDLRRL 324

 Worm   325 CRTVGAQPQARICAPAVNLLGHCDSVAVQEIGDENVVVFDKKSETGKVATIIIRGSSQSRIDDVE 389
            .|:|.|....||..|:...||:||.|.::|:||..:|.|..:.:..::||::|||::.:.:||:|
  Fly   325 SRSVNATVLPRITTPSQEELGYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIE 389

 Worm   390 RAVDDAVNTYKALTKDGKLLAGAGAVEIELAKEIESFGAKAPGLEQYAIKKFAHALETLPKAIAE 454
            ||:|||:|.:|.||:||:.|.||||.|||||.::.::....|||:|||::|||:|||..|||:||
  Fly   390 RALDDAINNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAE 454

 Worm   455 NAGMPTTETLTKLYAEH--VAGKKNAGIDI--WKRETMDAVVNNIFDLYAGKRLAIKLATDAAST 515
            |:|:..||.:.:||..|  .|| |..|.||  .|..|:|.....:||||..|...:|.|..||:|
  Fly   455 NSGINGTEIVNQLYLAHNNEAG-KTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAAT 518

 Worm   516 ILKVDQIIMSKQATGGPKPRGPKAQDEDDD 545
            |||||||||:|:| ||||.|  :|...||:
  Fly   519 ILKVDQIIMAKRA-GGPKVR--QAAGSDDE 545

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cct-8NP_500035.3 TCP1_theta 19..526 CDD:239457 283/510 (55%)
Cpn60_TCP1 38..526 CDD:278544 273/491 (56%)
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 283/510 (55%)
Cpn60_TCP1 40..529 CDD:278544 273/490 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160157721
Domainoid 1 1.000 544 1.000 Domainoid score I127
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H4802
Inparanoid 1 1.050 590 1.000 Inparanoid score I536
Isobase 1 0.950 - 0 Normalized mean entropy S523
OMA 1 1.010 - - QHG53640
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 1 1.000 - - FOG0004632
OrthoInspector 1 1.000 - - oto19812
orthoMCL 1 0.900 - - OOG6_102087
Panther 1 1.100 - - LDO PTHR11353
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1490
SonicParanoid 1 1.000 - - X3246
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.850

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