Protein Alignment Msc and HLH4C

DIOPT Version :10

• Sequence 1: NP_001398640.1
• Gene: Msc / 17681
• MGIID: 1333884
• Length: 238
• Species: Mus musculus
• Sequence 2: NP_001259243.1
• Gene: HLH4C / 31397
• FlyBaseID: FBgn0011277
• Length: 191
• Species: Drosophila melanogaster
• Alignment Length: 138
• Identity: 35/138 - (25%)
• Similarity: 56/138 - (40%)
• Gaps: 46/138 - (33%)

Mouse    22 PAPASKRPPLLRMERGYGSPSDISSAEEEDGEEEPGSLGAAGGCKRKRLRGADAGGAGGRAGGAG 86
            |||..:..|:..::     ||::.....|:              :|:|.|..
  Fly    74 PAPRRRTTPIAHLD-----PSELVGLSREE--------------RRRRRRAT------------- 106

Mouse    87 KKPLPPKGSAAECKQSQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYI 151
                          ...|.|...|||.|:...:.:|:.|:..||.:|||.||||::.|:||..||
  Fly   107 --------------LKYRTAHATRERIRVEAFNVSFAELRKLLPTLPPDKKLSKIEILKLAICYI 157

Mouse   152 AHLRQLLQ 159
            |:|..:|:
  Fly   158 AYLNHVLE 165

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Msc	NP_001398640.1	bHLH_TS_musculin	100..165	CDD:381546	25/60 (42%)
HLH4C	NP_001259243.1	bHLH_TS_HEN1	105..165	CDD:381544	24/86 (28%)