DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment his-72 and His3:CG33845

DIOPT Version :9

Sequence 1:NP_001255162.1 Gene:his-72 / 176660 WormBaseID:WBGene00001946 Length:151 Species:Caenorhabditis elegans
Sequence 2:NP_001027353.1 Gene:His3:CG33845 / 3772421 FlyBaseID:FBgn0053845 Length:136 Species:Drosophila melanogaster


Alignment Length:109 Identity:21/109 - (19%)
Similarity:37/109 - (33%) Gaps:21/109 - (19%)


- Green bases have known domain annotations that are detailed below.


 Worm    16 PPEERLQESSWPPRPPANRLQPPEESRSHIVTVQELSLSVRFVVTRSRLSFSSASFLSNVSFVRL 80
            |.::...:::....|....::.|...|...|.::|:          .|...|:...:..:.|.||
  Fly    17 PRKQLATKAARKSAPATGGVKKPHRYRPGTVALREI----------RRYQKSTELLIRKLPFQRL 71

 Worm    81 PR--------TSRLISASSRLPSELSRRHLKHTSSDSSRTPTCA 116
            .|        ..|..|::.....|.|..:|.....|   |..||
  Fly    72 VREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFED---TNLCA 112

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
his-72NP_001255162.1 None
His3:CG33845NP_001027353.1 PTZ00018 1..136 CDD:185400 21/109 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54047
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000188
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100119
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R543
SonicParanoid 1 1.000 - - X183
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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