DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gly-8 and Pgant9

DIOPT Version :9

Sequence 1:NP_001366981.1 Gene:gly-8 / 176595 WormBaseID:WBGene00001633 Length:421 Species:Caenorhabditis elegans
Sequence 2:NP_001097342.1 Gene:Pgant9 / 246627 FlyBaseID:FBgn0050463 Length:650 Species:Drosophila melanogaster


Alignment Length:422 Identity:143/422 - (33%)
Similarity:235/422 - (55%) Gaps:34/422 - (8%)


- Green bases have known domain annotations that are detailed below.


 Worm    18 AAEEAEKLPKCEH---VDPYENLE---GWLDLKPLTERKCNHTLKENLTEAESKKSEWGIKSFAF 76
            |||:.:|.|:.:.   :||..|.|   |.|. ||:       .|.:.:::...|..:.|....||
  Fly   120 AAEQPKKKPQEDSKKVIDPPANFEENPGELG-KPV-------RLPKEMSDEMKKAVDDGWTKNAF 176

 Worm    77 DALSSEKLGPNRNVGKQAHKLCEEEKYDASY-----STSVVVIHHNEALSTILRMINGIIEFTPK 136
            :...|:.:..:|.:.......|::|   |.|     .|.|::..||||.:.:||.::.:::.:|:
  Fly   177 NQYVSDLISVHRTLPDPRDAWCKDE---ARYLTNLPKTDVIICFHNEAWTVLLRTVHSVLDRSPE 238

 Worm   137 SLLKEIVLYEDASEEDHVLTKHLEKFAKIKGLEDKLIIKRSEYRQGLIRAKVHASRLATGEVIVF 201
            .|:.:|:|.:|.|:..| |.:.||.:.   ....|:.|.|.:.|:|||||::..:..|...|:.:
  Fly   239 HLIGKIILVDDYSDMPH-LKRQLEDYF---AAYPKVQIIRGQKREGLIRARILGANHAKSPVLTY 299

 Worm   202 MDSHCEVAERWLEPLLQPIKEDPKSIVLPVVDLINPVSFDY---SPSMVAKSGFDWGFTFKWIYL 263
            :|||||..|.||||||..|..:..::|.||:|:|:..:.:|   ....|...||||...|.|..:
  Fly   300 LDSHCECTEGWLEPLLDRIARNSTTVVCPVIDVISDETLEYHYRDSGGVNVGGFDWNLQFSWHPV 364

 Worm   264 PWEYFETPENNVKPFNSPAMPGGLLAMRKEYFVELGEYDMGMEIWGSENIELSLKAWLCGGRVVV 328
            |....:...:..:|..||.|.|||.::.:|:|..||.||.|.:|||.||:|||.|.|:|||.:.:
  Fly   365 PERERKRHNSTAEPVYSPTMAGGLFSIDREFFDRLGTYDSGFDIWGGENLELSFKTWMCGGTLEI 429

 Worm   329 APCSRVGHVFRMRRPYTSKPGMDTALYNAVRVAKTWLGEYESKFFAVKPRGAKMVFGDLTEPMQV 393
            .|||.|||:||.|.||..:.|::....|:||:|:.|:.|| |:::..:....|..:||:::..::
  Fly   430 VPCSHVGHIFRKRSPYKWRSGVNVLKKNSVRLAEVWMDEY-SQYYYHRIGNDKGDWGDVSDRRKL 493

 Worm   394 KDRLKCKDMKWFIENVYPEL----EPKVHDEL 421
            ::.||||..||:::|:||||    :...|.|:
  Fly   494 RNDLKCKSFKWYLDNIYPELFIPGDSVAHGEI 525

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gly-8NP_001366981.1 pp-GalNAc-T 110..410 CDD:133004 112/302 (37%)
Pgant9NP_001097342.1 WcaA 207..>478 CDD:223539 103/275 (37%)
pp-GalNAc-T 213..510 CDD:133004 112/301 (37%)
Ricin_B_lectin 521..640 CDD:279046 2/5 (40%)
RICIN 523..642 CDD:238092 1/3 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3736
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D606683at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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