DRSC/TRiP Functional Genomics Resources

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Protein Alignment vab-7 and Dr

DIOPT Version :10

Sequence 1:NP_499401.1 Gene:vab-7 / 176521 WormBaseID:WBGene00006873 Length:247 Species:Caenorhabditis elegans
Sequence 2:NP_477324.1 Gene:Dr / 45285 FlyBaseID:FBgn0000492 Length:515 Species:Drosophila melanogaster


Alignment Length:104 Identity:34/104 - (32%)
Similarity:49/104 - (47%) Gaps:23/104 - (22%)


- Green bases have known domain annotations that are detailed below.


 Worm    32 PPFEQQHHDPMGVVAAAAAAAAAG----------RHHPYDNRDDGQMRRYRTAFSREQIGRLERE 86
            |||     .|.|:...|.....|.          :|.|        .|:.||.|:.:|:..||::
  Fly   388 PPF-----GPPGMFPGAGFGGDANEPPRIKCNLRKHKP--------NRKPRTPFTTQQLLSLEKK 439

 Worm    87 FAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKR 125
            |.::.|:|...|.|.::.|.|.|..:|:||||||.|.||
  Fly   440 FREKQYLSIAERAEFSSSLRLTETQVKIWFQNRRAKAKR 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vab-7NP_499401.1 Homeodomain 69..125 CDD:459649 23/55 (42%)
DrNP_477324.1 Homeodomain 422..478 CDD:459649 23/55 (42%)

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