Protein Alignment vab-7 and ro

DIOPT Version :10

• Sequence 1: NP_499401.1
• Gene: vab-7 / 176521
• WormBaseID: WBGene00006873
• Length: 247
• Species: Caenorhabditis elegans
• Sequence 2: NP_524521.1
• Gene: ro / 43234
• FlyBaseID: FBgn0003267
• Length: 350
• Species: Drosophila melanogaster
• Alignment Length: 235
• Identity: 65/235 - (27%)
• Similarity: 89/235 - (37%)
• Gaps: 53/235 - (22%)

 Worm    32 PPFEQQHHDPMGVVAAAAAAAAAGRHHPY-------------------------DNRDDGQMRRY 71
            ||  |..|..:..|:...|.||.|..:|.                         ..|.:|:.||.
  Fly   132 PP--QLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSAFLARRRRKEGRQRRQ 194

 Worm    72 RTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQRVGGLAWPFP 136
            ||.||.||..|||.||.:..|:||..|.|||..|.|.|..||:||||||.||||..        .
  Fly   195 RTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRAKDKRIE--------K 251

 Worm   137 PQMAAYMLNPFAYEMWMKTAAASQFGATGPGNGAYGNNGSSTSPSAAG-SLPFLPPLGFPSFLSQ 200
            .|:..:..| |.......::...|...|.|..|..|.       .|.| .|.:......|:.|.:
  Fly   252 AQIDQHYRN-FVVANGFMSSIMGQAATTMPPGGVTGG-------VAVGVGLNYYAAAATPAALPK 308

 Worm   201 NSTKSPSSPHSDDSSKSKNTSSDDDESK---------PVN 231
            ::|:..:....||..:.:.......:.:         |:|
  Fly   309 DNTQDANFIDIDDQFQRQQQQKQQQQQQQQRRRETTTPIN 348

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vab-7	NP_499401.1	Homeodomain	69..125	CDD:459649	33/55 (60%)
ro	NP_524521.1	Homeodomain	196..248	CDD:459649	30/51 (59%)