DRSC/TRiP Functional Genomics Resources

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Protein Alignment vab-7 and lbl

DIOPT Version :10

Sequence 1:NP_499401.1 Gene:vab-7 / 176521 WormBaseID:WBGene00006873 Length:247 Species:Caenorhabditis elegans
Sequence 2:NP_001262805.1 Gene:lbl / 42541 FlyBaseID:FBgn0008651 Length:410 Species:Drosophila melanogaster


Alignment Length:112 Identity:37/112 - (33%)
Similarity:53/112 - (47%) Gaps:23/112 - (20%)


- Green bases have known domain annotations that are detailed below.


 Worm    24 ASRASSFSP----------PFEQQHHDPMGVVAAAAAAAAAGRHHPYDNRDDGQMRRYRTAFSRE 78
            ||::|..:|          .|::: .||      |.....|.|.:|      .:.|:.||||:.:
  Fly   210 ASKSSGDTPLDALFQLSTKNFDEE-QDP------ATLNIFATRSNP------KKKRKSRTAFTNQ 261

 Worm    79 QIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKR 125
            ||..||:.|..:.|:|...|.|:|..|.|....:..||||||.|.||
  Fly   262 QIFELEKRFLYQKYLSPADRDEIAGGLGLSNAQVITWFQNRRAKLKR 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vab-7NP_499401.1 Homeodomain 69..125 CDD:459649 24/55 (44%)
lblNP_001262805.1 COG5576 206..332 CDD:227863 37/112 (33%)
Homeodomain 252..308 CDD:459649 24/55 (44%)

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