Protein Alignment vab-7 and bap

DIOPT Version :10

• Sequence 1: NP_499401.1
• Gene: vab-7 / 176521
• WormBaseID: WBGene00006873
• Length: 247
• Species: Caenorhabditis elegans
• Sequence 2: NP_732637.1
• Gene: bap / 42537
• FlyBaseID: FBgn0004862
• Length: 382
• Species: Drosophila melanogaster
• Alignment Length: 227
• Identity: 65/227 - (28%)
• Similarity: 87/227 - (38%)
• Gaps: 58/227 - (25%)

 Worm    29 SFSPPFEQQHHDPMGVVAAAAAAAAAGRHHPYDNRDDGQMRRYRTAFSREQIGRLEREFAKENYV 93
            |.||......||..|:                     .:.:|.|.|||..|:..|||.||::.|:
  Fly   157 SSSPSESPLSHDGSGL---------------------SRKKRSRAAFSHAQVFELERRFAQQRYL 200

 Worm    94 SRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQRVG-------GLAWPFPPQMAAYMLNPFAYEM 151
            |...|.|:|..|.|.|..:|:||||||.|.||:::.       |.:...|.|:.........|
  Fly   201 SGPERSEMAKSLRLTETQVKIWFQNRRYKTKRKQIQQHEAALLGASKRVPVQVLVREDGSTTY-- 263

 Worm   152 WMKTAAASQFGATGPGNG---AYGNNGSSTSPSAAGSLPFLP--PLGFPSFLSQNSTKSPSSPHS 211
                   :...|.|.|:|   |..|........|.|.|| ||  .:.||.|..|:....|..|.:
  Fly   264 -------AHMAAPGAGHGLDPALINIYRHQLQLAYGGLP-LPQMQMPFPYFYPQHKVPQPIPPPT 320

 Worm   212 DDSSKSKNTSSDDDESKPVNFSNSPSSSSPSP 243
            ..||               ..:.|.:||||.|
  Fly   321 QSSS---------------FVTASSASSSPVP 337

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vab-7	NP_499401.1	Homeodomain	69..125	CDD:459649	27/55 (49%)
bap	NP_732637.1	Homeodomain	176..232	CDD:459649	27/55 (49%)