DRSC/TRiP Functional Genomics Resources

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Protein Alignment vab-7 and CG15696

DIOPT Version :10

Sequence 1:NP_499401.1 Gene:vab-7 / 176521 WormBaseID:WBGene00006873 Length:247 Species:Caenorhabditis elegans
Sequence 2:NP_650921.1 Gene:CG15696 / 42469 FlyBaseID:FBgn0038833 Length:179 Species:Drosophila melanogaster


Alignment Length:162 Identity:42/162 - (25%)
Similarity:68/162 - (41%) Gaps:44/162 - (27%)


- Green bases have known domain annotations that are detailed below.


 Worm     1 MQSFDIESL--------IGVNKVPSLVEMVAASRASSFSPPFEQQHHDPMGVVA--------AAA 49
            |..|.||.:        :|.|....:::.:.||.      ||....| |...|:        |:|
  Fly     1 MSDFSIEYILNRAGDRYVGTNASLGVLQRLRASL------PFHPYAH-PASYVSKESGGSPPASA 58

 Worm    50 AAAAA--------GRHHPYD-----------NRDDGQMRRYRTAFSREQIGRLEREFAKENYVSR 95
            |.|..        .|:||..           .|..|::.  |..|:.:|:..||..:.:.||:|.
  Fly    59 AEAQIPVYDWLQYTRYHPPKLPRALRQNAPAKRTPGRLP--RIPFTPQQLQALENAYKESNYLSA 121

 Worm    96 KTRGELAAELNLPEGTIKVWFQNRRMKDKRQR 127
            :...:||..|.|....:|:||||||.:::|::
  Fly   122 EDANKLADSLELTNTRVKIWFQNRRARERREK 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vab-7NP_499401.1 Homeodomain 69..125 CDD:459649 19/55 (35%)
CG15696NP_650921.1 Homeodomain 95..144 CDD:459649 15/50 (30%)

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