Protein Alignment vab-7 and abd-A

DIOPT Version :10

• Sequence 1: NP_499401.1
• Gene: vab-7 / 176521
• WormBaseID: WBGene00006873
• Length: 247
• Species: Caenorhabditis elegans
• Sequence 2: NP_732176.1
• Gene: abd-A / 42037
• FlyBaseID: FBgn0000014
• Length: 590
• Species: Drosophila melanogaster
• Alignment Length: 107
• Identity: 38/107 - (35%)
• Similarity: 54/107 - (50%)
• Gaps: 23/107 - (21%)

 Worm    43 GVVAAAAAAAAAG-----RH----------HPYD-------NRDDG-QMRRYRTAFSREQIGRLE 84
            ||:..|..|..||     |:          .|::       |..:| ..||.|..::|.|...||
  Fly   350 GVMPGAGGAGGAGIADLPRYPWMTLTDWMGSPFERVVCGDFNGPNGCPRRRGRQTYTRFQTLELE 414

 Worm    85 REFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQ 126
            :||...:|::|:.|.|:|..|.|.|..||:||||||||.|::
  Fly   415 KEFHFNHYLTRRRRIEIAHALCLTERQIKIWFQNRRMKLKKE 456

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vab-7	NP_499401.1	Homeodomain	69..125	CDD:459649	27/55 (49%)
abd-A	NP_732176.1	Homeodomain	399..455	CDD:459649	27/55 (49%)
		Abdominal-A	456..478	CDD:403567	0/1 (0%)