DRSC/TRiP Functional Genomics Resources

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Protein Alignment vab-7 and Ubx

DIOPT Version :10

Sequence 1:NP_499401.1 Gene:vab-7 / 176521 WormBaseID:WBGene00006873 Length:247 Species:Caenorhabditis elegans
Sequence 2:NP_536752.1 Gene:Ubx / 42034 FlyBaseID:FBgn0003944 Length:389 Species:Drosophila melanogaster


Alignment Length:62 Identity:29/62 - (46%)
Similarity:41/62 - (66%) Gaps:0/62 - (0%)


- Green bases have known domain annotations that are detailed below.


 Worm    65 DGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQ 126
            :|..||.|..::|.|...||:||...:|::|:.|.|:|..|.|.|..||:||||||||.|::
  Fly   292 NGLRRRGRQTYTRYQTLELEKEFHTNHYLTRRRRIEMAHALCLTERQIKIWFQNRRMKLKKE 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vab-7NP_499401.1 Homeodomain 69..125 CDD:459649 27/55 (49%)
UbxNP_536752.1 Homeodomain 296..352 CDD:459649 27/55 (49%)

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