DRSC/TRiP Functional Genomics Resources

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Protein Alignment vab-7 and Antp

DIOPT Version :10

Sequence 1:NP_499401.1 Gene:vab-7 / 176521 WormBaseID:WBGene00006873 Length:247 Species:Caenorhabditis elegans
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:101 Identity:34/101 - (33%)
Similarity:51/101 - (50%) Gaps:6/101 - (5%)


- Green bases have known domain annotations that are detailed below.


 Worm    32 PPFEQQH---HDPMGVVAAAAAAAAAGRHHPYDNRDDG---QMRRYRTAFSREQIGRLEREFAKE 90
            |...|.|   |.|......:.::......:|:.....|   :.:|.|..::|.|...||:||...
  Fly   255 PQMHQGHPGQHTPPSQNPNSQSSGMPSPLYPWMRSQFGKCQERKRGRQTYTRYQTLELEKEFHFN 319

 Worm    91 NYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQ 126
            .|::|:.|.|:|..|.|.|..||:||||||||.|::
  Fly   320 RYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 355

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vab-7NP_499401.1 Homeodomain 69..125 CDD:459649 26/55 (47%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 9/50 (18%)
Homeodomain 298..354 CDD:459649 26/55 (47%)

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