DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment vab-7 and zen2

DIOPT Version :10

Sequence 1:NP_499401.1 Gene:vab-7 / 176521 WormBaseID:WBGene00006873 Length:247 Species:Caenorhabditis elegans
Sequence 2:NP_476794.1 Gene:zen2 / 40827 FlyBaseID:FBgn0004054 Length:252 Species:Drosophila melanogaster


Alignment Length:241 Identity:68/241 - (28%)
Similarity:97/241 - (40%) Gaps:60/241 - (24%)


- Green bases have known domain annotations that are detailed below.


 Worm    42 MGVVAAAAAAAAAGRHHPYDNRDDGQMRRYRTAFSREQIGRLEREFAKENYVSRKTRGELAAELN 106
            :.|.||..|.          .|...:.:|.|||||..|:..|||||....|::|..|.|::..|.
  Fly    27 LNVEAAPTAT----------TRSSEKSKRSRTAFSSLQLIELEREFHLNKYLARTRRIEISQRLA 81

 Worm   107 LPEGTIKVWFQNRRMK-----DKRQRVGGLAWPFP------------PQMAAYMLNPFAYEMWMK 154
            |.|..:|:||||||||     :::..:|.|....|            .|:...:|. :| ...::
  Fly    82 LTERQVKIWFQNRRMKLKKSTNRKGAIGALTTSIPLSSQSSEDLQKDDQIVERLLR-YA-NTNVE 144

 Worm   155 TAAASQF-------GATGPGNGAYGN-NGSSTSPSAAGSLPFLPPLGFPSFLSQNSTKS-----P 206
            ||...|.       |...|...:|.. :..|..|.|      ||.|.|..| ..|...|     |
  Fly   145 TAPLRQVDHGVLEEGQITPPYQSYDYLHEFSPEPMA------LPQLPFNEF-DANWASSWLGLEP 202

 Worm   207 SSPHSDDSSKSKNTSSDDDESKPV--NF---SNSPSSSSPSPYSTD 247
            :.|.::      |....:.:.:|:  ||   |||.|:||......|
  Fly   203 TIPIAE------NVIEHNTQDQPMIQNFCWDSNSSSASSSDILDVD 242

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vab-7NP_499401.1 Homeodomain 69..125 CDD:459649 28/60 (47%)
zen2NP_476794.1 Homeodomain 44..100 CDD:459649 28/55 (51%)

Return to query results.
Submit another query.