DRSC/TRiP Functional Genomics Resources

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Protein Alignment vab-7 and inv

DIOPT Version :10

Sequence 1:NP_499401.1 Gene:vab-7 / 176521 WormBaseID:WBGene00006873 Length:247 Species:Caenorhabditis elegans
Sequence 2:NP_523699.3 Gene:inv / 36239 FlyBaseID:FBgn0001269 Length:576 Species:Drosophila melanogaster


Alignment Length:121 Identity:42/121 - (34%)
Similarity:62/121 - (51%) Gaps:7/121 - (5%)


- Green bases have known domain annotations that are detailed below.


 Worm    24 ASRASSFSPPFEQQHHDPMGVVAAAAAAAAAGRHHPYDNRDDG---QMRRYRTAFSREQIGRLER 85
            :.|.||...|..::...|  ..:::||....|.....:..|.|   :.:|.|||||..|:.||:.
  Fly   426 SDRPSSGRSPRARKPKKP--ATSSSAAGGGGGGVEKGEAADGGGVPEDKRPRTAFSGTQLARLKH 488

 Worm    86 EFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQRVGGLAWPFPPQMAA 141
            ||.:..|::.|.|.:|:.||.|.|..||:||||:|.|.|:.  .|...|...|:.|
  Fly   489 EFNENRYLTEKRRQQLSGELGLNEAQIKIWFQNKRAKLKKS--SGTKNPLALQLMA 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
vab-7NP_499401.1 Homeodomain 69..125 CDD:459649 27/55 (49%)
invNP_523699.3 Homeodomain 472..528 CDD:459649 27/55 (49%)
Engrail_1_C_sig 529..554 CDD:431338 4/16 (25%)

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