Protein Alignment vab-7 and bsh

DIOPT Version :10

• Sequence 1: NP_499401.1
• Gene: vab-7 / 176521
• WormBaseID: WBGene00006873
• Length: 247
• Species: Caenorhabditis elegans
• Sequence 2: NP_477350.2
• Gene: bsh / 35266
• FlyBaseID: FBgn0000529
• Length: 429
• Species: Drosophila melanogaster
• Alignment Length: 224
• Identity: 63/224 - (28%)
• Similarity: 84/224 - (37%)
• Gaps: 60/224 - (26%)

 Worm    25 SRASSF-SPPFEQQHHDPMGVVAAAAAAAAAG----RHHPYDNRDDGQMRRYRTAFSREQIGRLE 84
            |:||.| ..||    ....|.|...|.....|    ||        .:.|:.||.||..|:..||
  Fly   238 SQASLFGGAPF----FGAPGCVPELALGLGMGVNALRH--------CRRRKARTVFSDPQLSGLE 290

 Worm    85 REFAKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQ--RVGGLAWPF---------PPQ 138
            :.|..:.|:|...|.|||..|.|.|..:|.||||||||.|:|  |......|.         .|.
  Fly   291 KRFEGQRYLSTPERVELATALGLSETQVKTWFQNRRMKHKKQLRRRDNANEPVDFSRSEPGKQPG 355

 Worm   139 MAAYMLNPFAYEMWMKTAAASQFGATGPGNGAYGNNGSSTSPSAAGSLPF-LPPLGFPSFLSQNS 202
            .|.            .::..|:.|...||:    ..|:.|.|::...|.. |...|:
  Fly   356 EAT------------SSSGDSKHGKLNPGS----VGGTPTQPTSEQQLQMCLMQQGY-------- 396

 Worm   203 TKSPSSPHSDDSSKSKNTSSDDDESKPVN 231
                   .:||.|..:..|.|:|.|..|:
  Fly   397 -------STDDYSDLEADSGDEDNSSDVD 418

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vab-7	NP_499401.1	Homeodomain	69..125	CDD:459649	27/55 (49%)
bsh	NP_477350.2	Homeodomain	275..331	CDD:459649	27/55 (49%)