Protein Alignment vab-7 and scro

DIOPT Version :10

• Sequence 1: NP_499401.1
• Gene: vab-7 / 176521
• WormBaseID: WBGene00006873
• Length: 247
• Species: Caenorhabditis elegans
• Sequence 2: NP_001015473.1
• Gene: scro / 3355151
• FlyBaseID: FBgn0287186
• Length: 468
• Species: Drosophila melanogaster
• Alignment Length: 242
• Identity: 61/242 - (25%)
• Similarity: 91/242 - (37%)
• Gaps: 63/242 - (26%)

 Worm    23 AASRASSFSPPFEQQHHDPMGVVAAAAAAAAAGRHHPYDNRDDGQMRRYRTAFSREQIGRLEREF 87
            |.||..|.|......|...|..:||.:.:.:.....|.     .|.|:.|..|::.|:..|||.|
  Fly   213 AISRLMSSSASGTMSHMGNMSGLAACSVSDSKPLQFPL-----AQRRKRRVLFTQAQVYELERRF 272

 Worm    88 AKENYVSRKTRGELAAELNLPEGTIKVWFQNRRMKDKRQRVGGLAWPFPPQMAAYMLNPFAYEMW 152
            .::.|:|...|..||:.::|....:|:||||.|.|.|||                     |.|..
  Fly   273 KQQRYLSAPEREHLASLIHLTPTQVKIWFQNHRYKCKRQ---------------------AKEKA 316

 Worm   153 MKTAAASQFGATGP-----------GNGAYGNNGSSTSPSAAGSLPFLPPLGFPSFLSQNSTKSP 206
            |.........|:.|           |....|||.||.|                   .|:.|.|.
  Fly   317 MAEQNQHNQPASSPRRVAVPVLVKDGKPCSGNNSSSQS-------------------QQHGTNST 362

 Worm   207 SSPHSDDSSKSKNTSS-----DDDESKPVNF--SNSPSSSSPSPYST 246
            |:.::..|:.:.|.:|     ..:.|..:|.  .::|:|.||...|:
  Fly   363 SAGNNTGSANNGNANSGIVSVTANVSGGLNLITGDAPNSHSPDTSSS 409

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
vab-7	NP_499401.1	Homeodomain	69..125	CDD:459649	21/55 (38%)
scro	NP_001015473.1	Homeodomain	254..310	CDD:459649	21/55 (38%)