DRSC/TRiP Functional Genomics Resources

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Protein Alignment hcp-3 and His3:CG33845

DIOPT Version :9

Sequence 1:NP_499128.1 Gene:hcp-3 / 176359 WormBaseID:WBGene00001831 Length:288 Species:Caenorhabditis elegans
Sequence 2:NP_001027353.1 Gene:His3:CG33845 / 3772421 FlyBaseID:FBgn0053845 Length:136 Species:Drosophila melanogaster


Alignment Length:126 Identity:62/126 - (49%)
Similarity:81/126 - (64%) Gaps:9/126 - (7%)


- Green bases have known domain annotations that are detailed below.


 Worm   164 RGNRTGPSSSDRVRMRAGRNR------VTKTRRYRPGQKALEEIRKYQKTEDLLIQKAPFARLVR 222
            |.:..|.:...::..:|.|..      |.|..|||||..||.|||:|||:.:|||:|.||.||||
  Fly     9 RKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVR 73

 Worm   223 EIMQTSTPFGADCRIRSDAISALQEAAEAFLVEMFEGSSLISTHAKRVTLMTTDIQLYRRL 283
            ||.|   .|..|.|.:|.|:.|||||:||:||.:||.::|.:.||||||:|..||||.||:
  Fly    74 EIAQ---DFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRI 131

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hcp-3NP_499128.1 Histone 156..284 CDD:278551 62/126 (49%)
H3 183..288 CDD:128705 58/107 (54%)
His3:CG33845NP_001027353.1 PTZ00018 1..136 CDD:185400 62/126 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG1745
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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