DRSC/TRiP Functional Genomics Resources

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Protein Alignment lap-1 and S-Lap4

DIOPT Version :9

Sequence 1:NP_498854.1 Gene:lap-1 / 176185 WormBaseID:WBGene00002249 Length:491 Species:Caenorhabditis elegans
Sequence 2:NP_729613.1 Gene:S-Lap4 / 326188 FlyBaseID:FBgn0052064 Length:524 Species:Drosophila melanogaster


Alignment Length:344 Identity:90/344 - (26%)
Similarity:145/344 - (42%) Gaps:63/344 - (18%)


- Green bases have known domain annotations that are detailed below.


 Worm   167 SESVRETARLIDTPANILT----TDALVDEAVKVGNATGSKITV-IRGEELL-KAGFGGIYHVGK 225
            :|:.....|:.||||..:|    ..|.||.....|      ||| ||..|.: :........:.|
  Fly   196 AEAQNLARRMCDTPACCMTPTLFAQATVDALCPCG------ITVEIRTMEWIEQQRLHSFLMIAK 254

 Worm   226 AGPTPPAFVVLSH------EVPGSTEHIALVGKGVVYDTGGLQIKTKTGMPNMKRDMGGAA---G 281
            ....||..:.:::      :.|     |..:|||:.:::|.:.::...||...:..|.|||   .
  Fly   255 GSCEPPVLMEITYCGTNPEDKP-----ILFLGKGITFNSGAMNLRKCRGMEEYRACMSGAASCVA 314

 Worm   282 MLEAYSALVKHGFSQTLHACLCIV---ENNVSPIANKPDDIIKMLSGKTVEINNTDAEGRLILAD 343
            |:...:||     :..::.| ||:   ||..|.:|.||.|::.:::.|::.:.|.|..|.:::||
  Fly   315 MMRCVAAL-----ALPINVC-CIIPLCENMPSGMACKPGDVVTLMNHKSMAVRNLDKAGVVVMAD 373

 Worm   344 GVFYAKETLKATTIFDMATL-TGAQAWLSGRLHGAAMTNDEQLENEIIKAGKASGDLV--APMLF 405
            .:.|.:.|.|...:.|:||| :|.:....|...| ..:|...:..:...||..:||.|  .|:  
  Fly   374 PLLYGQSTYKPRLVVDVATLGSGVKKAFGGGATG-IFSNSHYIWKQFQSAGALTGDRVWRLPL-- 435

 Worm   406 APDLFFGDLKSSIADMKNSNLGKMDGPPSAVAGLFIGAHIGFGEGLRWLHLDIAAPAEVGDRGTG 470
                 :...:..|.|....:|.. ||...|.:.|...........:.|.|||        .||||
  Fly   436 -----WNYYRKQITDEMGYDLSN-DGRGLANSCLAAAVLHELVPCVDWAHLD--------TRGTG 486

 Worm   471 YGPALFSTLLGKYTSVPML 489
                    ||.||..||.|
  Fly   487 --------LLTKYGLVPYL 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
lap-1NP_498854.1 Peptidase_M17 35..480 CDD:238247 83/333 (25%)
S-Lap4NP_729613.1 PRK00913 31..514 CDD:234863 90/344 (26%)
Peptidase_M17 35..514 CDD:238247 90/344 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0260
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D562530at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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