DRSC/TRiP Functional Genomics Resources

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Protein Alignment ceh-13 and Antp

DIOPT Version :10

Sequence 1:NP_498655.1 Gene:ceh-13 / 176069 WormBaseID:WBGene00000437 Length:202 Species:Caenorhabditis elegans
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:221 Identity:66/221 - (29%)
Similarity:91/221 - (41%) Gaps:57/221 - (25%)


- Green bases have known domain annotations that are detailed below.


 Worm     8 GAPP--------HNYYQDWPTTHSYYPSVPSSYSPL----------NHHPADIW--------AAH 46
            |:||        |...|.....|..:|.....|:.:          |||...::        ...
  Fly   178 GSPPLVDQMSGHHMNAQMTLPHHMGHPQAQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGA 242

 Worm    47 PSNYIMGNGHVSPPATASG----LSPPASRSSNSSAELPTGVTASQHNTYKWMHTKRSQRPAAPK 107
            |...:|..|. .||....|    .:||:...::.|:.:|:.:       |.||   |||.....:
  Fly   243 PPQGMMHQGQ-GPPQMHQGHPGQHTPPSQNPNSQSSGMPSPL-------YPWM---RSQFGKCQE 296

 Worm   108 KKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKR 172
            :|      ..|..:|.:|..|||||||..:|:.|.||.|||..|.|.|.|:||||||||||.||.
  Fly   297 RK------RGRQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE 355

 Worm   173 EKEKAFLARNTWESNSPTSSCSGEDV 198
            .|.|          ..|.|...|:::
  Fly   356 NKTK----------GEPGSGGEGDEI 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ceh-13NP_498655.1 Homeodomain 118..164 CDD:459649 25/45 (56%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 29/144 (20%)
Homeodomain 298..354 CDD:459649 32/61 (52%)

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