DRSC/TRiP Functional Genomics Resources

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Protein Alignment ceh-13 and zen

DIOPT Version :9

Sequence 1:NP_498655.1 Gene:ceh-13 / 176069 WormBaseID:WBGene00000437 Length:202 Species:Caenorhabditis elegans
Sequence 2:NP_476793.1 Gene:zen / 40828 FlyBaseID:FBgn0004053 Length:353 Species:Drosophila melanogaster


Alignment Length:183 Identity:68/183 - (37%)
Similarity:90/183 - (49%) Gaps:37/183 - (20%)


- Green bases have known domain annotations that are detailed below.


 Worm    24 YYPSVPSSYSPLNHHPADIWAAHPSNYIMGNGH-VSPPATASGLSPPASRSSNSSAELPTGVTAS 87
            |||...:.....:..|:::   ..|:.|.|:.| |:|    .|| ||.....||:   ||  |.:
  Fly     7 YYPVHQAKVGSYSADPSEV---KYSDLIYGHHHDVNP----IGL-PPNYNQMNSN---PT--TLN 58

 Worm    88 QHNTYKWMHTKR----SQRPAAP-------KKKVIDENGTNRTNFTTHQLTELEKEFHTAKYVNR 141
            .|.:.:.:|.:.    ...|:.|       |.|      .:||.||:.||.|||.||.:..|:.|
  Fly    59 DHCSPQHVHQQHVSSDENLPSQPNHDSQRVKLK------RSRTAFTSVQLVELENEFKSNMYLYR 117

 Worm   142 TRRTEIASNLKLQEAQVKIWFQNRRMKEKK-----RE-KEKAFLARNTWESNS 188
            |||.|||..|.|.|.||||||||||||.||     || |..|.||:...|.::
  Fly   118 TRRIEIAQRLSLCERQVKIWFQNRRMKFKKDIQGHREPKSNAKLAQPQAEQSA 170

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ceh-13NP_498655.1 Homeobox 118..164 CDD:278475 28/45 (62%)
zenNP_476793.1 Homeobox 93..146 CDD:278475 34/52 (65%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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