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Protein Alignment ceh-13 and prd
DIOPT Version :9
Sequence 1: | NP_498655.1 |
Gene: | ceh-13 / 176069 |
WormBaseID: | WBGene00000437 |
Length: | 202 |
Species: | Caenorhabditis elegans |
Sequence 2: | NP_723721.1 |
Gene: | prd / 34629 |
FlyBaseID: | FBgn0003145 |
Length: | 613 |
Species: | Drosophila melanogaster |
Alignment Length: | 125 |
Identity: | 36/125 - (28%) |
Similarity: | 56/125 - (44%) |
Gaps: | 28/125 - (22%) |
- Green bases have known domain annotations that are detailed below.
Worm 61 ATASGLSPPASRSSNSSAELPTGVTASQHNTYK-------------WMHTKRSQRPAAPKKKVID 112
::||| .||...:.:|:...:.|:...||..| .:..||.||..
Fly 162 SSASG--SPAGDGTKASSSCGSDVSGGHHNNGKPSDEDISDCESEPGIALKRKQRRC-------- 216
Worm 113 ENGTNRTNFTTHQLTELEKEFHTAKYVNRTRRTEIASNLKLQEAQVKIWFQNRRMKEKKR 172
||.|:..||.|||:.|...:|.:...|.|:|....|.||::::||.|||.:.:|:
Fly 217 -----RTTFSASQLDELERAFERTQYPDIYTREELAQRTNLTEARIQVWFSNRRARLRKQ 271
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
ceh-13 | NP_498655.1 |
Homeobox |
118..164 |
CDD:278475 |
18/45 (40%) |
prd | NP_723721.1 |
PAX |
27..154 |
CDD:238076 |
|
Homeobox |
217..269 |
CDD:278475 |
21/51 (41%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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