Protein Alignment hmg-1.2 and Dsp1

DIOPT Version :9

• Sequence 1: NP_001380090.1
• Gene: hmg-1.2 / 175890
• WormBaseID: WBGene00001972
• Length: 235
• Species: Caenorhabditis elegans
• Sequence 2: NP_001138203.1
• Gene: Dsp1 / 117294
• FlyBaseID: FBgn0278608
• Length: 397
• Species: Drosophila melanogaster
• Alignment Length: 241
• Identity: 92/241 - (38%)
• Similarity: 131/241 - (54%)
• Gaps: 43/241 - (17%)

 Worm    20 QSHQLQPNPSATMYQ------ATPRDM----GKPPVRGKTSPYGFFVKMCYEEHKKKYPNENVQV 74
            |.||.|........|      |:|...    .||  ||:.:.|.:||:.|.||||||:|:|.|..
  Fly   150 QQHQQQQQMQQQQQQQNVINSASPMSRVKADAKP--RGRMTAYAYFVQTCREEHKKKHPDETVIF 212

 Worm    75 TEISKKCSEKWKTMVDDEKRRFYELAQKDAERYQAEVS--VAAYGGEDAMRKRKRAKKDPHAPKR 137
            .|.|:||:|:||||||.||:||:|:|:||.:||:||:.  |...|......|:::..|||:||||
  Fly   213 AEFSRKCAERWKTMVDKEKKRFHEMAEKDKQRYEAEMQNYVPPKGAVVGRGKKRKQIKDPNAPKR 277

 Worm   138 ALSAFFFYSQDKRPEIQAGHPDWKVGQVAQELGKMWKLVPQETKDMYEQKAQADKDRYADEMRNY 202
            :|||||::..|:|.:::|.:|::.||.:|:|||:.|..|..|.|..||..|:.||.||..||..|
  Fly   278 SLSAFFWFCNDERNKVKALNPEFGVGDIAKELGRKWSDVDPEVKQKYESMAERDKARYEREMTEY 342

 Worm   203 K-----------------------------AEMQKMSGMDHYDDDN 219
            |                             |:.|.....:.:|||:
  Fly   343 KTSGKIAMSAPSMQASMQAQAQKAALLAAAAQQQHQQLEEQHDDDD 388

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
hmg-1.2	NP_001380090.1	HMGB-UBF_HMG-box	50..112	CDD:238686	36/61 (59%)
		HMGB-UBF_HMG-box	135..200	CDD:238686	30/64 (47%)
Dsp1	NP_001138203.1	HMG-box	182..252	CDD:294061	40/71 (56%)
		HMGB-UBF_HMG-box	275..339	CDD:238686	29/63 (46%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160161174
Domainoid	1	1.000	93	1.000	Domainoid score	I4775
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H37582
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000133
OrthoInspector	1	1.000	-	-		oto19593
orthoMCL	1	0.900	-	-		OOG6_100324
Panther	1	1.100	-	-	LDO	PTHR48112
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R3288
SonicParanoid	1	1.000	-	-		X111
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	11	10.870