DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment ubq-1 and Ubi-p5E

DIOPT Version :9

Sequence 1:	NP_741157.1	Gene:	ubq-1 / 175840	WormBaseID:	WBGene00006727	Length:	838	Species:	Caenorhabditis elegans
Sequence 2:	NP_001284937.1	Gene:	Ubi-p5E / 326237	FlyBaseID:	FBgn0086558	Length:	534	Species:	Drosophila melanogaster

Alignment Length:	534	Identity:	525/534 - (98%)
Similarity:	525/534 - (98%)	Gaps:	0/534 - (0%)

- Green bases have known domain annotations that are detailed below.

Worm   305 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 369
            ||||||||||||||||||.||||||||||||||||||||||||||||||||||||||||||||||
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKES 65

Worm   370 TLHLVLRLRGGMQIFVKTLIGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 434
            |||||||||||||||||||.|||||||||.|||||||||||||||||||||||||||||||||||
  Fly    66 TLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGR 130

Worm   435 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRL 499
            ||||||||||||||||||||||||||||||||||||||||.||||||||||||||||||||||||
  Fly   131 TLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRL 195

Worm   500 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQD 564
            |||||||||||||||||||||||||||||||||||||||||||||||||||.|||||||||||||
  Fly   196 IFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQD 260

Worm   565 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASD 629
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||.||
  Fly   261 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSD 325

Worm   630 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 694
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   326 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 390

Worm   695 KTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 759
            ||||||||.||||||||||||||||||||||||||||||||||||||||||||||||||||||||
  Fly   391 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 455

Worm   760 GMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 824
            |||||||||||||||||||.|||||||||||||||||||||||||||||||||||||||||||||
  Fly   456 GMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKE 520

Worm   825 STLHLVLRLRGGDI 838
            ||||||||||||.|
  Fly   521 STLHLVLRLRGGAI 534

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
ubq-1	NP_741157.1	Ubiquitin	1..76	CDD:176398
		UBQ	1..72	CDD:214563
		Ubiquitin	77..152	CDD:176398
		UBQ	77..148	CDD:214563
		Ubiquitin	153..228	CDD:176398
		UBQ	153..224	CDD:214563
		Ubiquitin	229..304	CDD:176398
		UBQ	229..300	CDD:214563
		Ubiquitin	305..380	CDD:176398	73/74 (99%)
		UBQ	305..376	CDD:214563	69/70 (99%)
		Ubiquitin	381..456	CDD:176398	72/74 (97%)
		UBQ	381..452	CDD:214563	68/70 (97%)
		Ubiquitin	457..532	CDD:176398	73/74 (99%)
		UBQ	457..528	CDD:214563	69/70 (99%)
		Ubiquitin	533..608	CDD:176398	73/74 (99%)
		UBQ	533..604	CDD:214563	69/70 (99%)
		Ubiquitin	609..684	CDD:176398	73/74 (99%)
		UBQ	609..680	CDD:214563	69/70 (99%)
		Ubiquitin	685..760	CDD:176398	73/74 (99%)
		UBQ	685..756	CDD:214563	69/70 (99%)
		Ubiquitin	761..836	CDD:176398	73/74 (99%)
		UBQ	761..832	CDD:214563	69/70 (99%)
Ubi-p5E	NP_001284937.1	Ubiquitin	1..76	CDD:176398	73/74 (99%)
		UBQ	1..72	CDD:214563	69/70 (99%)
		Ubiquitin	77..152	CDD:176398	72/74 (97%)
		UBQ	77..148	CDD:214563	68/70 (97%)
		Ubiquitin	153..228	CDD:176398	73/74 (99%)
		UBQ	153..224	CDD:214563	69/70 (99%)
		Ubiquitin	229..304	CDD:176398	73/74 (99%)
		UBQ	229..300	CDD:214563	69/70 (99%)
		Ubiquitin	305..380	CDD:176398	73/74 (99%)
		UBQ	305..376	CDD:214563	69/70 (99%)
		Ubiquitin	381..456	CDD:176398	73/74 (99%)
		UBQ	381..452	CDD:214563	69/70 (99%)
		Ubiquitin	457..532	CDD:176398	73/74 (99%)
		UBQ	457..528	CDD:214563	69/70 (99%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160159495
Domainoid	1	1.000	140	1.000	Domainoid score	I2948
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	1	1.010	-	-		QHG53680
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0000540
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	1	0.900	-	-		OOG6_100667
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1586
SonicParanoid	1	1.000	-	-		X1758
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	7.780