DRSC/TRiP Functional Genomics Resources

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Protein Alignment H10E21.5 and rnf150a

DIOPT Version :9

Sequence 1:NP_497129.1 Gene:H10E21.5 / 175169 WormBaseID:WBGene00019185 Length:473 Species:Caenorhabditis elegans
Sequence 2:NP_001139044.1 Gene:rnf150a / 559804 ZFINID:ZDB-GENE-060213-1 Length:418 Species:Danio rerio


Alignment Length:396 Identity:120/396 - (30%)
Similarity:174/396 - (43%) Gaps:114/396 - (28%)


- Green bases have known domain annotations that are detailed below.


 Worm    30 VKLQCIDSEEVYGTLQTELTFSNKDGGGSTFLP-AYTDLCAPDMKFDDSQRVFFCKNCIQNCLSR 93
            |.|.|:|           .|.:.|:...:.|:. .|.|....::|.|.|:           |...
Zfish    24 VHLLCLD-----------FTVAEKEEWYTAFVNITYLDPVTSEIKTDRSE-----------CGRY 66

 Worm    94 VETAPKN-----ILIVADVKA---------PNNRVSWFH-VQTPVSNIRESGKQC---------- 133
            .|.:||.     :.:..|.:|         |:..:.|.. :.......||..:..          
Zfish    67 GEHSPKRDARGFVFMPQDRQACDGNTRFPLPHPSIPWIALIAKGNCTFREKIRHAAALNASAVVI 131

 Worm   134 -NVENSN----------------AMQSPEETSTDAL---------------------RSFSKTSV 160
             ||.:||                |:..||....:.:                     :..|:|||
Zfish   132 FNVGSSNSNDTITMPHHGTGDVVAIMIPEPKGREIMALLEKNITVAMHISIGTRNLQKYVSRTSV 196

 Worm   161 LFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKALTRIPTMTITPGMTQELQS 225
            :|||||||:||:||||||||||:||||||:|:||.||||.:||:||::::...||..| .:|..|
Zfish   197 VFVSISFIVLMIISLAWLVFYYIQRFRYANARDRSQRRLGDAAKKAISKLQVRTIRKG-DKETDS 260

 Worm   226 D---CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCKNDILKHFGY------WNDI 281
            |   ||||::.|:..||:|:|||:|::|::|:||||.:||||||||.:|||..|.      .:|.
Zfish   261 DFDNCAVCIEDYKPNDVVRILPCRHVFHRNCVDPWLQDHRTCPMCKMNILKALGIPPNTDCSDDA 325

 Worm   282 RNDIQMPTNSRGIADDFTIRLELGE------------------QEHQAPSADVISPEANSDTSDS 328
            ..|.:..:....||......:.:||                  ||..:..||..||...|.....
Zfish   326 PPDYETSSGQPSIAVTGASEVSVGESSLVLDQPLRITGLSHDYQEMNSVPADAESPHIASSEQHQ 390

 Worm   329 QGFSFD 334
            ...|.|
Zfish   391 PSMSND 396

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H10E21.5NP_497129.1 HRD1 <150..325 CDD:227568 89/222 (40%)
RING-H2_GRAIL 226..273 CDD:319582 28/49 (57%)
rnf150aNP_001139044.1 PA_GRAIL_like 45..180 CDD:239037 22/145 (15%)
UPF0233 <194..>219 CDD:299753 21/24 (88%)
zf-RING_2 263..306 CDD:290367 24/42 (57%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C161007950
Domainoid 1 1.000 82 1.000 Domainoid score I5903
eggNOG 1 0.900 - - E33208_3BHU7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm12529
orthoMCL 1 0.900 - - OOG6_107948
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3602
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.730

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