DRSC/TRiP Functional Genomics Resources

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Protein Alignment H10E21.5 and Rnf150

DIOPT Version :9

Sequence 1:NP_497129.1 Gene:H10E21.5 / 175169 WormBaseID:WBGene00019185 Length:473 Species:Caenorhabditis elegans
Sequence 2:NP_001178022.1 Gene:Rnf150 / 364983 RGDID:1304572 Length:437 Species:Rattus norvegicus


Alignment Length:416 Identity:126/416 - (30%)
Similarity:181/416 - (43%) Gaps:147/416 - (35%)


- Green bases have known domain annotations that are detailed below.


 Worm    30 VKLQCID-----SEEVYGTLQTELTFSNKD-------GGGSTFLPAYTD---------------- 66
            |.|.|:|     .||.| |....:|::..:       |||...|  :|:                
  Rat    24 VHLLCLDFTVAEKEEWY-TAFVNITYTEPESGAAVAGGGGGAEL--HTEKSECGRYGEHSPKQDA 85

 Worm    67 --------------LCAPDMKF--------------------DDSQRVFFCKNCIQNCLSRVETA 97
                          .|.|:.||                    .|..|..|.:|.           
  Rat    86 RGEVVMASSVHDRLACDPNTKFAAPAHGKHWIALIPKGNCTYRDKIRNAFLQNA----------- 139

 Worm    98 PKNILIVADVKAPNNRVSWFHVQTPVSNIRESGKQCNVENSNAMQSPEETSTDAL---------- 152
              :.:::.:|.:..|..    :..|         ...||:..|:..||....:.:          
  Rat   140 --SAVVIFNVGSNTNET----ITMP---------HAGVEDIVAIMIPEPKGKELVSLLERNVTVT 189

 Worm   153 -----------RSFSKTSVLFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKA 206
                       :..|:|||:|||||||:||:||||||||||:||||||:|:||.||||.:||:||
  Rat   190 MYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKA 254

 Worm   207 LTRIPTMTITPGMTQELQSD---CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCK 268
            ::::...||..| .:|.:||   ||||::.|:..||:|:|||:|::||||:|||||:||||||||
  Rat   255 ISKLQVRTIRKG-DKETESDFDNCAVCIEGYKPSDVVRILPCRHLFHKSCVDPWLLDHRTCPMCK 318

 Worm   269 NDILKHFGY------WNDIRNDIQ-----MPTNSRGIADDFTIR---------------LELGEQ 307
            .:|||..|.      .:|:..|.:     .|||....|.|.|:.               |::.:.
  Rat   319 MNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQD 383

 Worm   308 EHQAPSADVISPEANSD-----TSDS 328
            ...||.........|||     :|||
  Rat   384 PDPAPQEGEAIFTTNSDQEPAVSSDS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H10E21.5NP_497129.1 HRD1 <150..325 CDD:227568 93/229 (41%)
RING-H2_GRAIL 226..273 CDD:319582 31/49 (63%)
Rnf150NP_001178022.1 PA_GRAIL_like 45..192 CDD:239037 22/174 (13%)
UPF0233 <206..>231 CDD:299753 21/24 (88%)
zf-RING_2 275..318 CDD:290367 27/42 (64%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C162944271
Domainoid 1 1.000 84 1.000 Domainoid score I5671
eggNOG 1 0.900 - - E33208_3BHU7
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000832
OrthoInspector 1 1.000 - - otm18729
orthoMCL 1 0.900 - - OOG6_107948
Panther 1 1.100 - - O PTHR22765
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X295
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.700

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