DRSC/TRiP Functional Genomics Resources

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Protein Alignment H10E21.5 and Rnf150

DIOPT Version :10

Sequence 1:NP_497129.1 Gene:H10E21.5 / 175169 WormBaseID:WBGene00019185 Length:473 Species:Caenorhabditis elegans
Sequence 2:NP_001178022.1 Gene:Rnf150 / 364983 RGDID:1304572 Length:437 Species:Rattus norvegicus


Alignment Length:416 Identity:126/416 - (30%)
Similarity:181/416 - (43%) Gaps:147/416 - (35%)


- Green bases have known domain annotations that are detailed below.


 Worm    30 VKLQCID-----SEEVYGTLQTELTFSNKD-------GGGSTFLPAYTD---------------- 66
            |.|.|:|     .||.| |....:|::..:       |||...|  :|:                
  Rat    24 VHLLCLDFTVAEKEEWY-TAFVNITYTEPESGAAVAGGGGGAEL--HTEKSECGRYGEHSPKQDA 85

 Worm    67 --------------LCAPDMKF--------------------DDSQRVFFCKNCIQNCLSRVETA 97
                          .|.|:.||                    .|..|..|.:|.           
  Rat    86 RGEVVMASSVHDRLACDPNTKFAAPAHGKHWIALIPKGNCTYRDKIRNAFLQNA----------- 139

 Worm    98 PKNILIVADVKAPNNRVSWFHVQTPVSNIRESGKQCNVENSNAMQSPEETSTDAL---------- 152
              :.:::.:|.:..|..    :..|         ...||:..|:..||....:.:          
  Rat   140 --SAVVIFNVGSNTNET----ITMP---------HAGVEDIVAIMIPEPKGKELVSLLERNVTVT 189

 Worm   153 -----------RSFSKTSVLFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKA 206
                       :..|:|||:|||||||:||:||||||||||:||||||:|:||.||||.:||:||
  Rat   190 MYITIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAKKA 254

 Worm   207 LTRIPTMTITPGMTQELQSD---CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCK 268
            ::::...||..| .:|.:||   ||||::.|:..||:|:|||:|::||||:|||||:||||||||
  Rat   255 ISKLQVRTIRKG-DKETESDFDNCAVCIEGYKPSDVVRILPCRHLFHKSCVDPWLLDHRTCPMCK 318

 Worm   269 NDILKHFGY------WNDIRNDIQ-----MPTNSRGIADDFTIR---------------LELGEQ 307
            .:|||..|.      .:|:..|.:     .|||....|.|.|:.               |::.:.
  Rat   319 MNILKALGIPPNADCMDDLPIDFEGSLGGPPTNQITGASDTTVNESSVTLDPAVRTVGALQVVQD 383

 Worm   308 EHQAPSADVISPEANSD-----TSDS 328
            ...||.........|||     :|||
  Rat   384 PDPAPQEGEAIFTTNSDQEPAVSSDS 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
H10E21.5NP_497129.1 HRD1 <150..325 CDD:227568 93/229 (41%)
RING-H2_RNF130-like 226..271 CDD:438330 30/47 (64%)
Rnf150NP_001178022.1 PA_GRAIL_like 45..192 CDD:239037 22/174 (13%)
RING-H2_RNF150 269..323 CDD:438456 33/53 (62%)

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