Sequence 1: | NP_497129.1 | Gene: | H10E21.5 / 175169 | WormBaseID: | WBGene00019185 | Length: | 473 | Species: | Caenorhabditis elegans |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001178022.1 | Gene: | Rnf150 / 364983 | RGDID: | 1304572 | Length: | 437 | Species: | Rattus norvegicus |
Alignment Length: | 416 | Identity: | 126/416 - (30%) |
---|---|---|---|
Similarity: | 181/416 - (43%) | Gaps: | 147/416 - (35%) |
- Green bases have known domain annotations that are detailed below.
Worm 30 VKLQCID-----SEEVYGTLQTELTFSNKD-------GGGSTFLPAYTD---------------- 66
Worm 67 --------------LCAPDMKF--------------------DDSQRVFFCKNCIQNCLSRVETA 97
Worm 98 PKNILIVADVKAPNNRVSWFHVQTPVSNIRESGKQCNVENSNAMQSPEETSTDAL---------- 152
Worm 153 -----------RSFSKTSVLFVSISFIILMVISLAWLVFYYVQRFRYAHAKDRLQRRLFNAARKA 206
Worm 207 LTRIPTMTITPGMTQELQSD---CAVCLDPYQLQDVIRLLPCKHIYHKSCIDPWLLEHRTCPMCK 268
Worm 269 NDILKHFGY------WNDIRNDIQ-----MPTNSRGIADDFTIR---------------LELGEQ 307
Worm 308 EHQAPSADVISPEANSD-----TSDS 328 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
H10E21.5 | NP_497129.1 | HRD1 | <150..325 | CDD:227568 | 93/229 (41%) |
RING-H2_GRAIL | 226..273 | CDD:319582 | 31/49 (63%) | ||
Rnf150 | NP_001178022.1 | PA_GRAIL_like | 45..192 | CDD:239037 | 22/174 (13%) |
UPF0233 | <206..>231 | CDD:299753 | 21/24 (88%) | ||
zf-RING_2 | 275..318 | CDD:290367 | 27/42 (64%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C162944271 | |
Domainoid | 1 | 1.000 | 84 | 1.000 | Domainoid score | I5671 |
eggNOG | 1 | 0.900 | - | - | E33208_3BHU7 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000832 | |
OrthoInspector | 1 | 1.000 | - | - | otm18729 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_107948 | |
Panther | 1 | 1.100 | - | - | O | PTHR22765 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X295 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
11 | 10.700 |