DRSC/TRiP Functional Genomics Resources

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Protein Alignment mac-1 and TER94

DIOPT Version :10

Sequence 1:NP_496814.1 Gene:mac-1 / 174974 WormBaseID:WBGene00003119 Length:813 Species:Caenorhabditis elegans
Sequence 2:NP_001097249.1 Gene:TER94 / 36040 FlyBaseID:FBgn0286784 Length:826 Species:Drosophila melanogaster


Alignment Length:830 Identity:269/830 - (32%)
Similarity:422/830 - (50%) Gaps:171/830 - (20%)


- Green bases have known domain annotations that are detailed below.


 Worm    72 ENDEKMEEKEAMDDVQEI--PIVKALETRKRKAPAAGRKSTGQAAAAKE---------------- 118
            |.||||:.|::.|..:::  .|:|..:...|......:.......:..:                
  Fly    17 EQDEKMKPKDSFDKREDLATAILKRKDRPNRLIVEEAQNDDNSVVSLSQAKMDELQLFRGDTVIL 81

 Worm   119 ----------VVLSDDS-EDE-----RAAR-------------------QLEKQIESLKTNRANK 148
                      :|||||: .||     |..|                   :..|::..|..:.:.:
  Fly    82 KGKRRKETVCIVLSDDTCPDEKIRMNRVVRNNLCVHLSDVVSVQSCPDVKYGKRVRILPIDESTE 146

 Worm   149 TVL-NLYTKKSAP-----STPVSTPKN---QATKKP-----------PGASAAPPALPRGLGAVS 193
            .|. ||:.....|     ..|:....|   :|..:|           |....||..:   :....
  Fly   147 GVTGNLFEIYLKPYFLEAYRPIHMGDNFIVRAAMRPIEFKVVLTDPEPYCIVAPETV---IFCDG 208

 Worm   194 DTISPRESH-----VKFEHIGGADRQFLEVCRLA-MHLKRPKTFATLGVDPPRGFIVHGPPGCGK 252
            |.|...|..     |.::.|||..:|..::..:. :.|:.|..|..:||.||||.:::||||.||
  Fly   209 DPIKREEEEESLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGK 273

 Worm   253 TMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIAPRRETA 317
            |:.|:|||.|.......:...|::|.::||:|..:|:.|:.|::|||.|:.:|:||||||:|:..
  Fly   274 TLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRDKT 338

 Worm   318 QREMERRVVSQLCSSLDELVLPPREKPLKDQLTFGDDGSVAIIGDSPTAAGAGVLVIGTTSRPDA 382
            ..|:|||:||||.:.:|.:                             ...:.::|:..|:||::
  Fly   339 HGEVERRIVSQLLTLMDGM-----------------------------KKSSHLIVMAATNRPNS 374

 Worm   383 VDGGLRRAGRFENEISLGIPDETAREKILEKICK-VNLAGDVTLKQIAKLTPGYVGADLQALIRE 446
            :|..|||.|||:.||.:||||.|.|.::|....| :.|..||.|:|||..:.|:|||||.:|..|
  Fly   375 IDPALRRFGRFDREIDIGIPDATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSE 439

 Worm   447 AAKVAIDRVFDTIVVKNEGHKNLTVEQIKEELDRVLAWLQGD-DDPSALSELNGGLQISFEDFER 510
            ||                      ::||:|::|.:      | :|....:|:...|.::.|:|..
  Fly   440 AA----------------------LQQIREKMDLI------DLEDDKIDAEVLASLAVTMENFRY 476

 Worm   511 ALSTIQPAAKREGFATVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGIDCRP-QGILLC 574
            |::...|:|.||....||:.:|.|||.|..|:|:|:..:.||::..|.|...|:  :| :|:|..
  Fly   477 AMTKSSPSALRETVVEVPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGM--QPSRGVLFY 539

 Worm   575 GPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRARDSQPCVIFFDEIDAL 639
            |||||||||||||:|||...|||||||||||.|:.||||..||.:|.:||.:.|||:||||:|::
  Fly   540 GPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSI 604

 Worm   640 VPKR--SHGESSGGA-RLVNQLLTEMDGVEGRQKVFLIGATNRPDIVDAAILRPGRLDKILFVDF 701
            ...|  :.|::.|.| |::||:||||||:..::.||:|||||||||:|.|||||||||:::::..
  Fly   605 AKARGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL 669

 Worm   702 PSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQLPELAGFTGADLAALIHESSLLALQARV---- 762
            |..:.|..||:.:.:   :..|.:::|...||::.:  ||:||||..:...:..||::..:    
  Fly   670 PDDKSREAILKANLR---KSPLAKEVDLTYIAKVTQ--GFSGADLTEICQRACKLAIRQAIEAEI 729

 Worm   763 ---------------LENDESVKGVGMRHFREAASRIRPSVTEADRKKYE 797
                           ::.|:.|..:...||.||....|.||::.|.:|||
  Fly   730 RREKERAENQNSAMDMDEDDPVPEITSAHFEEAMKFARRSVSDNDIRKYE 779

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mac-1NP_496814.1 Nucleolin_bd 5..65 CDD:465247
CDC48 <191..804 CDD:273521 237/638 (37%)
TER94NP_001097249.1 CDC48 47..787 CDD:273521 260/800 (33%)
Blue background indicates that the domain is not in the aligned region.

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