DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mpdz and Patj

DIOPT Version :9

Sequence 1:NP_001292213.1 Gene:Mpdz / 17475 MGIID:1343489 Length:2069 Species:Mus musculus
Sequence 2:NP_477342.1 Gene:Patj / 44100 FlyBaseID:FBgn0067864 Length:871 Species:Drosophila melanogaster


Alignment Length:1042 Identity:339/1042 - (32%)
Similarity:459/1042 - (44%) Gaps:354/1042 - (33%)


- Green bases have known domain annotations that are detailed below.


Mouse     6 DKNRALQAAERLQSKLKERGD----VANEDKLSLLKSVLQSPLFSQILNLQTSLQQLKDQVNIAT 66
            |.:.|||..|.::..:.|..|    :...:.||.:..:||.|:|..|:::|.||.:|..|:    
  Fly     6 DISSALQQIEAVKKGIDESDDPKLQMQTAESLSTILGILQDPVFRTIVHVQDSLSELNAQL---- 66

Mouse    67 LATAAADHAHTPQFSSAVISNLQSESLLLSPNHGNLEALPGPGAPAVMDGKPTCDELDQLIKNMA 131
                                 .|..|:|  ||..:::.                           
  Fly    67 ---------------------AQHPSML--PNDFDIDV--------------------------- 81

Mouse   132 QGRHVEIFELLKPPCGGLGFSVVGLRSENRGELGIFVQEIQEGSVAHRDGRLKETDQILAINGQV 196
                          .|.|..|:      |.||:.....|.:..|.:|.                 
  Fly    82 --------------AGNLVLSL------NGGEVMYDFDEQRSSSHSHS----------------- 109

Mouse   197 LDQTITHQQAISILQKAKDTVQLVIARGSLPPVSSPRISRSPSAASTIS-----AHSNPMHWQHV 256
                                     |.||  |..|..:...|...|..|     |......:..:
  Fly   110 -------------------------APGS--PDKSGGVGEEPRPQSQNSKGAGVADLYATDYAQI 147

Mouse   257 ETIELVNDGSGLGFGIIGGKATGVIVKTILPGGVADQHGRLCSGDHILKIGDTDLAGMSSEQVAQ 321
            :.|||||||:||||||||.:.:||||||||||||||:.|||.||||||:|||.:|..|.|||||.
  Fly   148 QAIELVNDGTGLGFGIIGARNSGVIVKTILPGGVADKDGRLRSGDHILQIGDVNLHEMVSEQVAA 212

Mouse   322 VLRQCGNRVKLMIARGAVEETPASS--------------------------SLG---ITLSSSTS 357
            ||||.|..|:|::||...:..|...                          |.|   |...|||:
  Fly   213 VLRQSGTHVRLVVARPVEQSVPTPQYALEPGTAVVPTRVLVDPAELERYLISTGYPEIFGESSTA 277

Mouse   358 ST---------------SEMRVDASTQKND-----ESETFDVELTKNVQGLGITIAGYIGDKKLE 402
            ||               :.|.:|.:....:     |:|...|||.|:..|||||||||:.:|: |
  Fly   278 STPQTTTEDDRFVYRGETSMLIDPNIDLEELLALPETEKLQVELKKDANGLGITIAGYVCEKE-E 341

Mouse   403 PSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRHTGQTVRLTLMR----- 462
            .|||||||::..||.:..|||::.|:||.|||.:|||::|.||||:|:.:||.|.|.|.|     
  Fly   342 LSGIFVKSVSPGSAADLSGRIRVNDRIIEVDGQSLQGYSNHQAVELLKKSGQVVNLRLERYLRGP 406

Mouse   463 -------------------KGASQEAEL-TSRGDTAKDVDLPAENC--EKDEESL---------- 495
                               .|....|.: |....|:.....|:.:.  |.:||:|          
  Fly   407 KFEQLQQAIAANDKLPSSAPGTPSRAPMPTPVATTSSATTTPSRSITRELEEEALPAPEAFMTTP 471

Mouse   496 -------------------------SLKRNTSILPIEEEGFPLLSAELEEAEDV----------- 524
                                     ||..:|.|:|.|.  .||  |:..||::.           
  Fly   472 PSVTTMTTTTLSSFGAGKQLVAVRDSLDGSTKIIPTEV--VPL--ADKTEAKNSGVITRHKYYTD 532

Mouse   525 -----QQEAALLTKWQRIMGINYEIVVAHVSKFSENSGLGISLEATVG---------HHFIRSVL 575
                 ..|..::.|||:|:|.:.|::||.:.||:. .|||||||.||.         ||:|||:|
  Fly   533 PELSDDAETEIIRKWQKIVGSDVEVIVAQIKKFAV-GGLGISLEGTVDVEGGREVRPHHYIRSIL 596

Mouse   576 PEGPVGHSGKLFSGDELLEVNGINLLGENHQDVVNILKELPIDVTMVCCRR---TVPPIALSEMD 637
            |:||||.:|.|.||||||||||..|||.||.:||.||||||:||.|||.|.   ::.|.:...:.
  Fly   597 PDGPVGVNGVLRSGDELLEVNGERLLGMNHLEVVAILKELPLDVRMVCGRNRNSSLLPFSDDTLK 661

Mouse   638 SLDIN----------------DLELTEKPHIDLGEFIGSSETEDPMLAMSDVDQNAEEIQTPLAM 686
            .|..|                |..|.....:..|:.:.::..     :.|.:...:.|..|.|||
  Fly   662 KLSNNFENLLPATDRLVKAKSDGSLATAGSVADGDSVAAAAA-----SFSKLKSRSLEPLTGLAM 721

Mouse   687 WEAGGQSIELEKGSRGLGFSILDYQDPIDPANTVIVIRSLVPGGIAEKDGRLFPGDRLMFVNDIN 751
            |.:..|.|||.||.|||||||||||||:||.:|:||||||||||:|:.||||.|||||:|||.||
  Fly   722 WSSQPQIIELVKGDRGLGFSILDYQDPLDPNDTLIVIRSLVPGGVAQLDGRLIPGDRLLFVNSIN 786

Mouse   752 LENSTLEEAVEALKGAPSGMVRIGVAKPLPLSPEEGYVSAKEDAFLCSPHACKESGLSDKALFRA 816
            |||::|::||:|||||..|:||||||||||::..             |..||.            
  Fly   787 LENASLDQAVQALKGASKGVVRIGVAKPLPMTDN-------------SLKACS------------ 826

Mouse   817 DLALIDTPDAESIAESRFESQFSPDNDSVYSTQASIFSLHDGTCSDGMNYGPSLPS-SPPKDVTS 880
                    :|.:.:|...::|.||                           |:||: :||....|
  Fly   827 --------NASTTSEETLDAQPSP---------------------------PALPTVAPPAMPPS 856

Mouse   881 SS 882
            :|
  Fly   857 AS 858

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpdzNP_001292213.1 L27_2 6..63 CDD:117611 19/60 (32%)
PDZ_signaling 140..222 CDD:238492 9/81 (11%)
PDZ_signaling 256..335 CDD:238492 55/78 (71%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..372 9/41 (22%)
PDZ 375..464 CDD:214570 49/112 (44%)
PDZ_signaling 553..622 CDD:238492 47/77 (61%)
PDZ_signaling 694..777 CDD:238492 62/82 (76%)
PDZ_signaling 994..1064 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1144
PDZ_signaling 1151..1242 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1278..1313
PDZ 1349..1434 CDD:214570
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1449..1473
PDZ_signaling 1483..1563 CDD:238492
MPDZ_u10 1564..1625 CDD:293272
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1571..1611
PDZ 1626..1710 CDD:214570
PDZ_signaling 1722..1802 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1809..1848
PDZ_signaling 1859..1944 CDD:238492
PDZ_signaling 1985..2068 CDD:238492
PatjNP_477342.1 L27 12..70 CDD:295425 17/82 (21%)
PDZ_signaling 154..226 CDD:238492 51/71 (72%)
PDZ_signaling 318..400 CDD:238492 46/82 (56%)
PDZ_signaling 557..643 CDD:238492 51/86 (59%)
PDZ_signaling 726..807 CDD:238492 59/80 (74%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 129 1.000 Domainoid score I5274
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4314
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003499
OrthoInspector 1 1.000 - - otm42890
orthoMCL 1 0.900 - - OOG6_103252
Panther 1 1.100 - - LDO PTHR19964
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4712
SonicParanoid 1 1.000 - - X1763
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.750

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