DRSC/TRiP Functional Genomics Resources

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Protein Alignment Mpdz and inaD

DIOPT Version :9

Sequence 1:NP_001292213.1 Gene:Mpdz / 17475 MGIID:1343489 Length:2069 Species:Mus musculus
Sequence 2:NP_001246470.1 Gene:inaD / 37629 FlyBaseID:FBgn0001263 Length:686 Species:Drosophila melanogaster


Alignment Length:715 Identity:193/715 - (26%)
Similarity:317/715 - (44%) Gaps:130/715 - (18%)


- Green bases have known domain annotations that are detailed below.


Mouse  1154 VELWREPSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKPGDRIIEVDGMDL 1218
            |.|.:...||.||.||.|.   .:.|......|||||.::.||||...|.||.||||:.::|.|:
  Fly    30 VTLDKTGKKSFGICIVRGE---VKDSPNTKTTGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDV 91

Mouse  1219 RDASHEQAVEAIRKAGNPVVFMVQSIINRPRKSPLPSLPHS---LYPKYSFS---STNPFADSLQ 1277
            |:::.:..::.|::|...:...:|: .::..:....|.|.|   :..|..|:   :||..|..  
  Fly    92 RNSTEQAVIDLIKEADFKIELEIQT-FDKSDEQQAKSDPRSNGYMQAKNKFNQEQTTNNNASG-- 153

Mouse  1278 LTTDQAPSQSESETEKPALCNVPPS------------------------------SPSVFSEMGS 1312
               .|...|.:.:.:..|..|...|                              :..:.:|.|.
  Fly   154 ---GQGMGQGQGQGQGMAGMNRQQSMQKRNTTFTASMRQKHSNYADEDDEDTRDMTGRIRTEAGY 215

Mouse  1313 DCAQPSA-------TAVSEDEDKEDEFGYSWKNIQERYGSLTGQLHVIELEKGQS-GLGLSLAGN 1369
            :..:.||       .....|:::||||||:...|.:|| ::...|..||:::..| .|||:|||:
  Fly   216 EIDRASAGNCKLNKQEKDRDKEQEDEFGYTMAKINKRY-NMMKDLRRIEVQRDASKPLGLALAGH 279

Mouse  1370 KDRTRMSVFIVGIDPTGAAGRDGRLQIADELLEINGQILYGRSHQNASSIIKCAPSKVKIIFIRN 1434
            |||.:|:.|:.|:||.||.| ...::..||::|:||.:|..|.|.|||::.|..... |::.|.:
  Fly   280 KDRQKMACFVAGVDPNGALG-SVDIKPGDEIVEVNGNVLKNRCHLNASAVFKNVDGD-KLVMITS 342

Mouse  1435 ADAVNQMAVCPGIAADSPSSTSDSPQNKEVEPCSTTSASAADLSSLTDVYQLELPK-------DQ 1492
            ....|...:|                   |:|......::.:...:.|    :.||       .:
  Fly   343 RRKPNDEGMC-------------------VKPIKKFPTASDETKFIFD----QFPKARTVQVRKE 384

Mouse  1493 GGLGIAIC---EEDTINGVMIESLTEHGGAAKDGRLKPGDHILAVDDEVVAGCPVEKFISLLKTA 1554
            |.|||.:.   ..:..:|:.|..|.| |..|:...:|.||.:|||:.:|......:....|||.|
  Fly   385 GFLGIMVIYGKHAEVGSGIFISDLRE-GSNAELAGVKVGDMLLAVNQDVTLESNYDDATGLLKRA 448

Mouse  1555 KATVK---LTVRAENPACPAVPSSAVTVSGERKDNSQTPAVPAPDLEPIPSTSRSSTPAVFASDP 1616
            :..|.   ||:::|. |..|..::......|.|...:.|                       .:|
  Fly   449 EGVVTMILLTLKSEE-AIKAEKAAEEKKKEEAKKEEEKP-----------------------QEP 489

Mouse  1617 ATCPIIPGCETTIEISKGQTGLGLSIVGGSD--TLLGAIIIHEVYEEGAACKDGRLWAGDQILEV 1679
            ||..|.|..:..||:...:..:|:.:.||.:  ...|.:|.| ||.||....|.||...|.|.::
  Fly   490 ATAEIKPNKKILIELKVEKKPMGVIVCGGKNNHVTTGCVITH-VYPEGQVAADKRLKIFDHICDI 553

Mouse  1680 NG--IDLRKATHDEAINVLRQTPQR-VRLTLYRDEAPYKEEDVCDTFTIELQKRPGKGLGLSIVG 1741
            ||  |.:...|..:...:...|.:: |.||::|.:.|..|:     |.::|.|:.||.||||:  
  Fly   554 NGTPIHVGSMTTLKVHQLFHTTYEKAVTLTVFRADPPELEK-----FNVDLMKKAGKELGLSL-- 611

Mouse  1742 KRNDTGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRHATQEAVAALLKCSLGAVTLEVGRVK 1806
            ..|:.|..::|:::|...:.|.:|.:||.|...||:.:.....:...||.|.:.|.|::||.|.|
  Fly   612 SPNEIGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKGANGKVSMEVTRPK 676

Mouse  1807  1806
              Fly   677  676

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
MpdzNP_001292213.1 L27_2 6..63 CDD:117611
PDZ_signaling 140..222 CDD:238492
PDZ_signaling 256..335 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 348..372
PDZ 375..464 CDD:214570
PDZ_signaling 553..622 CDD:238492
PDZ_signaling 694..777 CDD:238492
PDZ_signaling 994..1064 CDD:238492
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1125..1144
PDZ_signaling 1151..1242 CDD:238492 31/87 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1278..1313 7/64 (11%)
PDZ 1349..1434 CDD:214570 35/85 (41%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1449..1473 2/23 (9%)
PDZ_signaling 1483..1563 CDD:238492 26/92 (28%)
MPDZ_u10 1564..1625 CDD:293272 11/60 (18%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1571..1611 4/39 (10%)
PDZ 1626..1710 CDD:214570 25/88 (28%)
PDZ_signaling 1722..1802 CDD:238492 25/79 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1809..1848
PDZ_signaling 1859..1944 CDD:238492
PDZ_signaling 1985..2068 CDD:238492
inaDNP_001246470.1 PDZ_signaling 27..115 CDD:238492 31/87 (36%)
PDZ_signaling 259..340 CDD:238492 34/82 (41%)
PDZ_signaling 377..457 CDD:238492 22/80 (28%)
PDZ_signaling 500..584 CDD:238492 24/84 (29%)
PDZ_signaling 597..672 CDD:238492 24/76 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 64 1.000 Domainoid score I10112
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4314
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_103252
Panther 1 1.100 - - O PTHR19964
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.760

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