DRSC/TRiP Functional Genomics Resources

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Protein Alignment abu-14 and NimB2

DIOPT Version :9

Sequence 1:NP_495966.2 Gene:abu-14 / 174464 WormBaseID:WBGene00004174 Length:373 Species:Caenorhabditis elegans
Sequence 2:NP_723857.1 Gene:NimB2 / 260645 FlyBaseID:FBgn0028543 Length:421 Species:Drosophila melanogaster


Alignment Length:351 Identity:79/351 - (22%)
Similarity:118/351 - (33%) Gaps:89/351 - (25%)


- Green bases have known domain annotations that are detailed below.


 Worm    29 VKNETGLALSRAKRQCCSSNSNSCC--------------------GNNNNVQCIPVCLQQCQSSC 73
            |.:||.|.:::.:    |:.::..|                    |...::..|.||   |....
  Fly   115 VLDETALFINKTR----SAMASGVCYKEVPTASLLRNSRDQFVGNGTTPDMSRIQVC---CDGYE 172

 Worm    74 QTSQCIQQCQPACNQQCGGNNQVILLPQTNNC---------NQCQQQCISSCATPICAQSCNNQC 129
            :.....::|:|.|...|  .|.:...|.|..|         .:|...|...|...:|.:  .|:|
  Fly   173 RNPHIYRRCEPICADDC--RNGICTAPNTCVCIPGHVRTAEGKCISTCPLGCGNGVCDE--RNEC 233

 Worm   130 SSSCGNSAPQIVVLQPQQNQCGSCQSSCQQTCP--TCNCQSACAPACGGNNNNQQIIVVQQDNSC 192
            ....|.|      |:|:..:  .||..|:..|.  .|...:.||...|..        :..|.||
  Fly   234 KCREGYS------LEPETRK--YCQPECKPGCSFGRCVAPNKCACLDGYR--------LAADGSC 282

 Worm   193 SSNCNNQCSSSCSTPICIQSCQSSCQQACQPTCQPQCMPSCSSSCTSNQ--APIVIVAQQG---D 252
            ...|:     ||....|......:| .|.....|.:|.|.||..|.:.:  .|.:.....|   |
  Fly   283 EPVCD-----SCENGKCTAPGHCNC-NAGYLKLQGRCEPICSIPCKNGRCIGPDICECASGFEWD 341

 Worm   253 SCSNSCSNQCQSACPTPICVQQCNSQCQSQCSNSCSGNSCNQQQVIVLQQQDNCQNQCQSSCMNT 317
            ..|..|..:|...|...:||.  |:||           .|....|....|::.||..|...|.|.
  Fly   342 RKSAECLPKCDLPCLNGVCVG--NNQC-----------DCKTGYVRDEHQRNICQPHCPQGCQNG 393

 Worm   318 CQSSATVLQCQP-------ICQQTCQ 336
            ..|:.....|:|       ..:||||
  Fly   394 YCSAPNFCICRPGFIKSGIKGRQTCQ 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
abu-14NP_495966.2 OATP <178..261 CDD:332116 20/87 (23%)
NimB2NP_723857.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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