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Protein Alignment hlh-3 and Fer1
DIOPT Version :9
Sequence 1: | NP_495938.4 |
Gene: | hlh-3 / 174447 |
WormBaseID: | WBGene00001950 |
Length: | 170 |
Species: | Caenorhabditis elegans |
Sequence 2: | NP_001262334.1 |
Gene: | Fer1 / 2768661 |
FlyBaseID: | FBgn0037475 |
Length: | 256 |
Species: | Drosophila melanogaster |
Alignment Length: | 176 |
Identity: | 46/176 - (26%) |
Similarity: | 74/176 - (42%) |
Gaps: | 36/176 - (20%) |
- Green bases have known domain annotations that are detailed below.
Worm 21 SSVTKQTKQKRNERERKRVDQVNQGFVLLQERVPKAAGNKAKLSKVETLREAARYIQELQKQL-- 83
:|...|.:|..|.|||:|:..:|:.|..|:..:|.....| :||||:||:.|..||..|.:.:
Fly 81 ASQMAQQRQAANLRERRRMQSINEAFEGLRTHIPTLPYEK-RLSKVDTLKLAISYITFLSEMVKK 144
Worm 84 -------GMS-STSFHNSMPADFPTPEQS-------------PVYPQSVCSMMAQTPSPSYTSPY 127
|:| ..::....|......::: ..||.| .:.|:|.:|. .|.
Fly 145 DKNGNEPGLSLQRNYQKEPPKKIILKDRTGGVAHSLSWYRKGDRYPGS--KLYARTWTPE--DPR 205
Worm 128 YPPPQMM------SSNQHDMSSHYYQESSSSSASTS--GDHHSFYS 165
.|..|.: :|||:..|:....:.|.|.|..| |...|.:|
Fly 206 GPHSQPLPLYNNSNSNQNQNSNQSSDDFSGSGADMSDPGAAASIFS 251
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
hlh-3 | NP_495938.4 |
HLH |
32..83 |
CDD:197674 |
20/50 (40%) |
Fer1 | NP_001262334.1 |
HLH |
92..144 |
CDD:197674 |
20/52 (38%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG4029 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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