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Protein Alignment skpo-1 and Spf45
DIOPT Version :9
Sequence 1: | NP_495768.1 |
Gene: | skpo-1 / 174340 |
WormBaseID: | WBGene00009897 |
Length: | 655 |
Species: | Caenorhabditis elegans |
Sequence 2: | NP_001036426.1 |
Gene: | Spf45 / 3355114 |
FlyBaseID: | FBgn0086683 |
Length: | 403 |
Species: | Drosophila melanogaster |
Alignment Length: | 154 |
Identity: | 30/154 - (19%) |
Similarity: | 58/154 - (37%) |
Gaps: | 44/154 - (28%) |
- Green bases have known domain annotations that are detailed below.
Worm 471 MMTVPVRSPQRLTTSVTERLFGGSVDMAAVNIQRGRDHGLRSYNDYRRF--------CNLRPITS 527
:::.|:.|.:.| .|:.||:..|..|:| .::..:..|:|.:. .|...::.
Fly 66 VVSKPLISGKAL-PSILERINRGDWDVA-------DEYDPQRPNEYEKLKEKSNGSDKNRAGVSD 122
Worm 528 FNDWPEVPDENVRQRIGQLYRTPDDLDFYVGGILEQPAAGSLLGATFACVIGKQFERLRDGDRFY 592
..|..:...:..|.|:|: .:|| .::.:|.:|..:.|. .|..|.| .|
Fly 123 REDRDDKEKDRKRGRVGR-------REFY----RDEVSAPNLKLSGFG-------HRQNDDD-MY 168
Worm 593 YENPGVFTS---------PQLAEL 607
..:||:... |.|.|:
Fly 169 LPSPGLVAKQGGATIAPPPSLQEM 192
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
1 |
0.950 |
- |
0.78878 |
Normalized mean entropy |
S3904 |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.950 |
|
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